Amsterdam Neuroscience

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• Additional file 14 of Distinct cell type-specific protein signatures in GRN and MAPT genetic subtypes of frontotemporal dementia

  Miedema, S. (Creator), Mol, M. O. (Creator), Koopmans, F. (Creator), Hondius, D. C. (Creator), van Nierop, P. (Creator), Menden, K. (Creator), de Veij Mestdagh, C. F. (Creator), van Rooij, J. (Creator), Ganz, A. B. (Creator), Paliukhovich, I. (Creator), Melhem, S. (Creator), Li, K. W. (Creator), Holstege, H. (Creator), Rizzu, P. (Creator), van Kesteren, R. (Creator), van Swieten, J. C. (Creator), Heutink, P. (Creator) & Smit, G. (Creator), Figshare, 2022

  DOI: 10.6084/m9.figshare.20267335.v1, https://springernature.figshare.com/articles/dataset/Additional_file_14_of_Distinct_cell_type-specific_protein_signatures_in_GRN_and_MAPT_genetic_subtypes_of_frontotemporal_dementia/20267335/1

  Dataset / Software: Dataset

• Additional file 8 of Distinct cell type-specific protein signatures in GRN and MAPT genetic subtypes of frontotemporal dementia

  Miedema, S. (Creator), Mol, M. O. (Creator), Koopmans, F. (Creator), Hondius, D. C. (Creator), van Nierop, P. (Creator), Menden, K. (Creator), de Veij Mestdagh, C. F. (Creator), van Rooij, J. (Creator), Ganz, A. B. (Creator), Paliukhovich, I. (Creator), Melhem, S. (Creator), Li, K. W. (Creator), Holstege, H. (Creator), Rizzu, P. (Creator), van Kesteren, R. (Creator), van Swieten, J. C. (Creator), Heutink, P. (Creator) & Smit, G. (Creator), Figshare, 2022

  DOI: 10.6084/m9.figshare.20267368.v1, https://springernature.figshare.com/articles/dataset/Additional_file_8_of_Distinct_cell_type-specific_protein_signatures_in_GRN_and_MAPT_genetic_subtypes_of_frontotemporal_dementia/20267368/1

  Dataset / Software: Dataset

• Additional file 1 of APOE ε4 genotype-dependent cerebrospinal fluid proteomic signatures in Alzheimer’s disease

  Konijnenberg, E. (Creator), Tijms, B. M. (Creator), Gobom, J. (Creator), Dobricic, V. (Creator), Bos, I. (Creator), Vos, S. (Creator), Tsolaki, M. (Creator), Verhey, F. (Creator), Popp, J. (Creator), Martinez-Lage, P. (Creator), Vandenberghe, R. (Creator), Lleó, A. (Creator), Frölich, L. (Creator), Lovestone, S. (Creator), Streffer, J. (Creator), Bertram, L. (Creator), Blennow, K. (Creator), Teunissen, C. E. (Creator), Veerhuis, R. (Creator), Smit, G. (Creator), Scheltens, P. (Creator), Zetterberg, H. (Creator) & Visser, P. J. (Creator), Figshare, 2020

  DOI: 10.6084/m9.figshare.12381488, https://springernature.figshare.com/articles/Additional_file_1_of_APOE_4_genotype-dependent_cerebrospinal_fluid_proteomic_signatures_in_Alzheimer_s_disease/12381488

  Dataset / Software: Dataset

• Additional file 3 of Distinct cell type-specific protein signatures in GRN and MAPT genetic subtypes of frontotemporal dementia

  Miedema, S. (Creator), Mol, M. O. (Creator), Koopmans, F. (Creator), Hondius, D. C. (Creator), van Nierop, P. (Creator), Menden, K. (Creator), de Veij Mestdagh, C. F. (Creator), van Rooij, J. (Creator), Ganz, A. B. (Creator), Paliukhovich, I. (Creator), Melhem, S. (Creator), Li, K. W. (Creator), Holstege, H. (Creator), Rizzu, P. (Creator), van Kesteren, R. (Creator), van Swieten, J. C. (Creator), Heutink, P. (Creator) & Smit, G. (Creator), Figshare, 2022

  DOI: 10.6084/m9.figshare.20267353.v1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Distinct_cell_type-specific_protein_signatures_in_GRN_and_MAPT_genetic_subtypes_of_frontotemporal_dementia/20267353/1

  Dataset / Software: Dataset

• The Generalized Ridge Estimator of the Inverse Covariance Matrix

  van Wieringen, W. (Contributor), figshare Academic Research System, 1 Jan 2021

  DOI: 10.6084/m9.figshare.7981724.v3, https://tandf.figshare.com/articles/dataset/The_generalized_ridge_estimator_of_the_inverse_covariance_matrix/7981724/3

  Dataset / Software: Dataset

• Sequential Learning of Regression Models by Penalized Estimation

  van Wieringen, W. (Creator) & Binder, H. (Creator), Taylor&Francis, 2022

  DOI: 10.6084/m9.figshare.19100092, https://tandf.figshare.com/articles/dataset/Sequential_learning_of_regression_models_by_penalized_estimation/19100092

  Dataset / Software: Dataset

• Li_Supplemental_Data – Supplemental material for Parenting and Self-Control Across Early to Late Adolescence: A Three-Level Meta-Analysis

  Li, J. (Contributor), Willems, Y. E. (Contributor), Stok, F. M. (Contributor), Deković, M. (Contributor), Bartels, M. (Contributor) & Finkenauer, C. (Contributor), Unknown Publisher, 1 Nov 2019

  DOI: 10.25384/sage.9782978.v1, https://sage.figshare.com/articles/Li_Supplemental_Data_Supplemental_material_for_Parenting_and_Self-Control_Across_Early_to_Late_Adolescence_A_Three-Level_Meta-Analysis/9782978/1

  Dataset / Software: Dataset

• 1024-channel electrophysiological recordings in macaque V1 and V4 during resting state

  Chen, X. (Contributor), Morales-Gregorio, A. (Contributor), Sprenger, J. (Contributor), Kleinjohann, A. (Contributor), Sridhar, S. (Contributor), Van Albada, S. (Contributor), Grün, S. (Contributor) & Roelfsema, P. (Contributor), German Neuroinformatics Node, 1 Jan 2021

  DOI: 10.12751/g-node.i20kyh, https://doi.gin.g-node.org/10.12751/g-node.i20kyh

  Dataset / Software: Dataset

• Population receptive fields in non-human primates from whole-brain fMRI and large-scale neurophysiology in visual cortex.

  Roelfsema, P. (Contributor), Chen, X. (Contributor), Klink, P. C. (Contributor) & Vanduffel, W. (Contributor), German Neuroinformatics Node, 1 Jan 2021

  DOI: 10.12751/g-node.2j01af, https://doi.gin.g-node.org/10.12751/g-node.2j01af

  Dataset / Software: Dataset

• Supplementary Material for: Treating Insomnia with High Risk of Depression Using Therapist-Guided Digital Cognitive, Behavioral, and Circadian Rhythm Support Interventions to Prevent Worsening of Depressive Symptoms: A Randomized Controlled Trial

  Lakbila-Kamal, O. (Contributor), Reesen, J. E. (Contributor), Dekkers, L. M. S. (Contributor), Blanken, T. F. (Contributor), Foster-Dingley, J. C. (Contributor), Leerssen, J. (Contributor), Mastenbroek, S. E. (Contributor), Ikelaar, S. L. C. (Contributor), Maksimovic, T. (Contributor), Lancee, J. (Contributor) & Albers, A. C. W. (Contributor), figshare Academic Research System, 1 Jan 2021

  DOI: 10.6084/m9.figshare.17128790.v1, https://karger.figshare.com/articles/dataset/Supplementary_Material_for_Treating_Insomnia_with_High_Risk_of_Depression_Using_Therapist-Guided_Digital_Cognitive_Behavioral_and_Circadian_Rhythm_Support_Interventions_to_Prevent_Worsening_of_Depressive_Symptoms_A_Randomized_Controlled_Tri/17128790/1

  Dataset / Software: Dataset

• Slow dissolving of distress contributes to hyperarousal

  Wassing, R. (Creator), Benjamins, J. S. (Contributor), Dekker, K. (Contributor), Moens, S. (Contributor), Spiegelhalder, K. (Contributor), Feige, B. (Contributor), Riemann, D. (Contributor), van der Sluis, S. (Contributor), Van Der Werf, Y. D. (Contributor), Talamini, L. M. (Contributor), Walker, M. P. (Contributor), Schalkwijk, F. (Contributor) & van Someren, E. (Contributor), Data Archiving and Networked Services (DANS), 2016

  DOI: 10.17026/dans-zs4-9f2m, https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:63429

  Dataset / Software: Dataset

• Data from: Large and fast human pyramidal neurons associate with intelligence

  Goriounova, N. (Contributor), Heyer, D. (Contributor), Wilbers, R. (Contributor), Verhoog, M. B. (Contributor), Giugliano, M. (Contributor), Verbist, C. (Contributor), Obermayer, J. (Contributor), Kerkhofs, A. (Contributor), Smeding, H. (Contributor), Verberne, M. (Contributor), Idema, S. (Contributor), Baayen, J. C. (Contributor), Pieneman, A. W. (Contributor), de Kock, C. (Contributor), Klein, M. (Contributor) & Mansvelder, H. (Contributor), Zenodo, 2018

  DOI: 10.5061/dryad.83dv5j7, https://zenodo.org/record/4983466

  Dataset / Software: Dataset

• Structural and functional specializations of human fast spiking neurons support fast cortical signaling

  Wilbers, R. (Creator) & Goriounova, N. (Contributor), DataverseNL, 2023

  DOI: 10.34894/tonoha, https://dataverse.nl/citation?persistentId=doi:10.34894/TONOHA

  Dataset / Software: Dataset

• Additional file 15 of Genome-wide identification of genes regulating DNA methylation using genetic anchors for causal inference

  Hop, P. J. (Contributor), Luijk, R. (Contributor), Daxinger, L. (Contributor), Iterson, M. V. (Contributor), Dekkers, K. F. (Contributor), Jansen, R. (Contributor), Meurs, J. B. J. V. (Contributor), Hoen, P. A. C. ’. (Contributor), Ikram, M. A. (Contributor), Greevenbroek, M. M. J. V. (Contributor), Boomsma, D. (Contributor), Slagboom, P. E. (Contributor), Veldink, J. H. (Contributor), Zwet, E. W. V. (Contributor) & Heijmans, B. T. (Contributor), Unknown Publisher, 1 Jan 2020

  DOI: 10.6084/m9.figshare.12891480.v1, https://springernature.figshare.com/articles/dataset/Additional_file_15_of_Genome-wide_identification_of_genes_regulating_DNA_methylation_using_genetic_anchors_for_causal_inference/12891480/1

  Dataset / Software: Dataset

• Additional file 3 of Genome-wide identification of genes regulating DNA methylation using genetic anchors for causal inference

  Hop, P. J. (Contributor), Luijk, R. (Contributor), Daxinger, L. (Contributor), Iterson, M. V. (Contributor), Dekkers, K. F. (Contributor), Jansen, R. (Contributor), Meurs, J. B. J. V. (Contributor), Hoen, P. A. C. ’. (Contributor), Ikram, M. A. (Contributor), Greevenbroek, M. M. J. V. (Contributor), Boomsma, D. (Contributor), Slagboom, P. E. (Contributor), Veldink, J. H. (Contributor), Zwet, E. W. V. (Contributor) & Heijmans, B. T. (Contributor), Unknown Publisher, 1 Jan 2020

  DOI: 10.6084/m9.figshare.12891501.v1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Genome-wide_identification_of_genes_regulating_DNA_methylation_using_genetic_anchors_for_causal_inference/12891501/1

  Dataset / Software: Dataset

• Additional file 10 of Genome-wide identification of genes regulating DNA methylation using genetic anchors for causal inference

  Hop, P. J. (Contributor), Luijk, R. (Contributor), Daxinger, L. (Contributor), Iterson, M. V. (Contributor), Dekkers, K. F. (Contributor), Jansen, R. (Contributor), Meurs, J. B. J. V. (Contributor), Hoen, P. A. C. ’. (Contributor), Ikram, M. A. (Contributor), Greevenbroek, M. M. J. V. (Contributor), Boomsma, D. (Contributor), Slagboom, P. E. (Contributor), Veldink, J. H. (Contributor), Zwet, E. W. V. (Contributor) & Heijmans, B. T. (Contributor), Unknown Publisher, 1 Jan 2020

  DOI: 10.6084/m9.figshare.12891462.v1, https://springernature.figshare.com/articles/dataset/Additional_file_10_of_Genome-wide_identification_of_genes_regulating_DNA_methylation_using_genetic_anchors_for_causal_inference/12891462/1

  Dataset / Software: Dataset

• Additional file 13 of Genome-wide identification of genes regulating DNA methylation using genetic anchors for causal inference

  Hop, P. J. (Contributor), Luijk, R. (Contributor), Daxinger, L. (Contributor), Iterson, M. V. (Contributor), Dekkers, K. F. (Contributor), Jansen, R. (Contributor), Meurs, J. B. J. V. (Contributor), Hoen, P. A. C. ’. (Contributor), Ikram, M. A. (Contributor), Greevenbroek, M. M. J. V. (Contributor), Boomsma, D. (Contributor), Slagboom, P. E. (Contributor), Veldink, J. H. (Contributor), Zwet, E. W. V. (Contributor) & Heijmans, B. T. (Contributor), Unknown Publisher, 1 Jan 2020

  DOI: 10.6084/m9.figshare.12891474.v1, https://springernature.figshare.com/articles/dataset/Additional_file_13_of_Genome-wide_identification_of_genes_regulating_DNA_methylation_using_genetic_anchors_for_causal_inference/12891474/1

  Dataset / Software: Dataset

• Additional file 2: of Age-related accrual of methylomic variability is linked to fundamental ageing mechanisms

  Slieker, R. C. (Creator), van Iterson, M. (Contributor), Luijk, R. (Contributor), Beekman, M. (Creator), Zhernakova, D. V. (Creator), Moed, M. H. (Creator), Mei, H. (Contributor), van Galen, M. (Contributor), Deelen, P. (Creator), Bonder, M. J. (Creator), Zhernakova, A. (Creator), Uitterlinden, A. G. (Contributor), Tigchelaar, E. F. (Creator), Stehouwer, C. D. A. (Creator), Schalkwijk, C. G. (Creator), van der Kallen, C. J. H. (Contributor), Hofman, A. (Creator), van Heemst, D. (Contributor), de Geus, E. (Contributor), van Dongen, J. (Contributor), Deelen, J. (Creator), van den Berg, L. H. (Contributor), van Meurs, J. (Contributor), Jansen, R. (Creator), 't Hoen, P. A. C. (Contributor), Franke, L. (Creator), Wijmenga, C. (Creator), Veldink, J. H. (Creator), Swertz, M. A. (Creator), van Greevenbroek, M. M. J. (Contributor), van Duijn, C. M. (Contributor), Boomsma, D. (Contributor), Slagboom, P. E. (Contributor) & Heijmans, B. T. (Creator), Figshare, 2016

  DOI: 10.6084/m9.figshare.c.3602444_d6, https://figshare.com/articles/Additional_file_2_of_Age-related_accrual_of_methylomic_variability_is_linked_to_fundamental_ageing_mechanisms/4336739

  Dataset / Software: Dataset

• Additional file 8: of Blood lipids influence DNA methylation in circulating cells

  Dekkers, K. F. (Creator), van Iterson, M. (Contributor), Slieker, R. C. (Creator), Moed, M. H. (Creator), Bonder, M. J. (Creator), van Galen, M. (Contributor), Mei, H. (Contributor), Zhernakova, D. V. (Creator), van den Berg, L. H. (Contributor), Deelen, J. (Creator), van Dongen, J. (Contributor), van Heemst, D. (Contributor), Hofman, A. (Creator), Hottenga, J. J. (Creator), van der Kallen, C. J. H. (Contributor), Schalkwijk, C. G. (Creator), Stehouwer, C. D. A. (Creator), Tigchelaar, E. F. (Creator), Uitterlinden, A. G. (Contributor), Willemsen, G. (Creator), Zhernakova, A. (Creator), Franke, L. (Creator), 't Hoen, P. A. C. (Contributor), Jansen, R. (Creator), van Meurs, J. (Contributor), Boomsma, D. (Contributor), van Duijn, C. M. (Contributor), van Greevenbroek, M. M. J. (Contributor), Veldink, J. H. (Creator), Wijmenga, C. (Creator), van Zwet, E. W. (Contributor), Slagboom, P. E. (Contributor), Jukema, J. W. (Contributor) & Heijmans, B. T. (Creator), Figshare, 2016

  DOI: 10.6084/m9.figshare.c.3596987_d9, https://figshare.com/articles/Additional_file_8_of_Blood_lipids_influence_DNA_methylation_in_circulating_cells/4320662

  Dataset / Software: Dataset

• Additional file 11: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

  Gupta, R. (Contributor), Dongen, J. (Contributor), Fu, Y. (Contributor), Abdellaoui, A. (Contributor), Tyndale, R. (Contributor), Velagapudi, V. (Contributor), Boomsma, D. (Contributor), Korhonen, T. (Contributor), Kaprio, J. (Contributor), Loukola, A. (Contributor) & Ollikainen, M. (Contributor), Unknown Publisher, 5 Jan 2019

  DOI: 10.6084/m9.figshare.7551692.v1, https://springernature.figshare.com/articles/Additional_file_11_of_Epigenome-wide_association_study_of_serum_cotinine_in_current_smokers_reveals_novel_genetically_driven_loci/7551692/1

  Dataset / Software: Dataset

• Additional file 3: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

  Gupta, R. (Contributor), Dongen, J. (Contributor), Fu, Y. (Contributor), Abdellaoui, A. (Contributor), Tyndale, R. (Contributor), Velagapudi, V. (Contributor), Boomsma, D. (Contributor), Korhonen, T. (Contributor), Kaprio, J. (Contributor), Loukola, A. (Contributor) & Ollikainen, M. (Contributor), Unknown Publisher, 5 Jan 2019

  DOI: 10.6084/m9.figshare.7551734.v1, https://springernature.figshare.com/articles/Additional_file_3_of_Epigenome-wide_association_study_of_serum_cotinine_in_current_smokers_reveals_novel_genetically_driven_loci/7551734/1

  Dataset / Software: Dataset

• Additional file 4: Table S1. of Integrative DNA methylome analysis of pan-cancer biomarkers in cancer discordant monozygotic twin-pairs

  Roos, L. (Creator), van Dongen, J. (Contributor), Bell, C. G. (Creator), Burri, A. (Creator), Deloukas, P. (Creator), Boomsma, D. (Contributor), Spector, T. D. (Creator) & Bell, J. T. (Creator), Figshare, 2016

  DOI: 10.6084/m9.figshare.c.3644438_d4, https://figshare.com/articles/Additional_file_4_Table_S1_of_Integrative_DNA_methylome_analysis_of_pan-cancer_biomarkers_in_cancer_discordant_monozygotic_twin-pairs/4468901

  Dataset / Software: Dataset

• Additional file 11: of Blood lipids influence DNA methylation in circulating cells

  Dekkers, K. F. (Creator), van Iterson, M. (Contributor), Slieker, R. C. (Creator), Moed, M. H. (Creator), Bonder, M. J. (Creator), van Galen, M. (Contributor), Mei, H. (Contributor), Zhernakova, D. V. (Creator), van den Berg, L. H. (Contributor), Deelen, J. (Creator), van Dongen, J. (Contributor), van Heemst, D. (Contributor), Hofman, A. (Creator), Hottenga, J. J. (Creator), van der Kallen, C. J. H. (Contributor), Schalkwijk, C. G. (Creator), Stehouwer, C. D. A. (Creator), Tigchelaar, E. F. (Creator), Uitterlinden, A. G. (Contributor), Willemsen, G. (Creator), Zhernakova, A. (Creator), Franke, L. (Creator), 't Hoen, P. A. C. (Contributor), Jansen, R. (Creator), van Meurs, J. (Contributor), Boomsma, D. (Contributor), van Duijn, C. M. (Contributor), van Greevenbroek, M. M. J. (Contributor), Veldink, J. H. (Creator), Wijmenga, C. (Creator), van Zwet, E. W. (Contributor), Slagboom, P. E. (Contributor), Jukema, J. W. (Contributor) & Heijmans, B. T. (Creator), Figshare, 2016

  DOI: 10.6084/m9.figshare.c.3596987_d2, https://figshare.com/articles/Additional_file_11_of_Blood_lipids_influence_DNA_methylation_in_circulating_cells/4320539

  Dataset / Software: Dataset

• Additional file 12: of Blood lipids influence DNA methylation in circulating cells

  Dekkers, K. F. (Creator), van Iterson, M. (Contributor), Slieker, R. C. (Creator), Moed, M. H. (Creator), Bonder, M. J. (Creator), van Galen, M. (Contributor), Mei, H. (Contributor), Zhernakova, D. V. (Creator), van den Berg, L. H. (Contributor), Deelen, J. (Creator), van Dongen, J. (Contributor), van Heemst, D. (Contributor), Hofman, A. (Creator), Hottenga, J. J. (Creator), van der Kallen, C. J. H. (Contributor), Schalkwijk, C. G. (Creator), Stehouwer, C. D. A. (Creator), Tigchelaar, E. F. (Creator), Uitterlinden, A. G. (Contributor), Willemsen, G. (Creator), Zhernakova, A. (Creator), Franke, L. (Creator), 't Hoen, P. A. C. (Contributor), Jansen, R. (Creator), van Meurs, J. (Contributor), Boomsma, D. (Contributor), van Duijn, C. M. (Contributor), van Greevenbroek, M. M. J. (Contributor), Veldink, J. H. (Creator), Wijmenga, C. (Creator), van Zwet, E. W. (Contributor), Slagboom, P. E. (Contributor), Jukema, J. W. (Contributor) & Heijmans, B. T. (Creator), Figshare, 2016

  DOI: 10.6084/m9.figshare.c.3596987_d7, https://figshare.com/articles/Additional_file_12_of_Blood_lipids_influence_DNA_methylation_in_circulating_cells/4320629

  Dataset / Software: Dataset

• Additional file 12: of Blood lipids influence DNA methylation in circulating cells

  Dekkers, K. (Contributor), Iterson, M. V. (Contributor), Slieker, R. (Contributor), Moed, M. (Contributor), Bonder, M. (Contributor), Galen, M. V. (Contributor), Mei, H. (Contributor), Zhernakova, D. (Contributor), Berg, L. V. D. (Contributor), Deelen, J. (Contributor), Dongen, J. V. (Contributor), Heemst, D. V. (Contributor), Hofman, A. (Contributor), Hottenga, J. J. (Contributor), Kallen, C. V. D. (Contributor), Schalkwijk, C. (Contributor), Stehouwer, C. (Contributor), Tigchelaar, E. (Contributor), Uitterlinden, A. (Contributor), Willemsen, G. (Contributor), Zhernakova, A. (Contributor), Franke, L. (Contributor), Hoen, P. (Contributor), Jansen, R. (Contributor), Meurs, J. V. (Contributor), Boomsma, D. (Contributor), Duijn, C. V. (Contributor), Greevenbroek, M. V. (Contributor), Veldink, J. (Contributor), Wijmenga, C. (Contributor), Zwet, E. V. (Contributor), Slagboom, P. (Contributor), Jukema, J. (Contributor) & Heijmans, B. (Contributor), Unknown Publisher, 27 Jun 2016

  DOI: 10.6084/m9.figshare.c.3596987_d7.v1, https://springernature.figshare.com/articles/dataset/Additional_file_12_of_Blood_lipids_influence_DNA_methylation_in_circulating_cells/4320629/1

  Dataset / Software: Dataset