Fingerprint Dive into the research topics where Bio Informatics (IBIVU) is active. These topic labels come from the works of this organisation's members. Together they form a unique fingerprint.

Sequence Alignment Medicine & Life Sciences
Proteins Medicine & Life Sciences
Genome Medicine & Life Sciences
Metabolic Networks and Pathways Medicine & Life Sciences
Systems Biology Medicine & Life Sciences
Genes Engineering & Materials Science
Alignment Mathematics
Fluxes Engineering & Materials Science

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Profiles

Photo of Sanne Abeln

dr. Sanne Abeln

Person: Academic

20052019
Photo of Evert Bosdriesz

dr. Evert Bosdriesz

Person: Academic

20132019
Photo of Anton Feenstra

dr. ir. Anton Feenstra

Person: Academic

19962019
No photo of Juami Gils, van
No photo of Maryam Hashemi Shabestari

dr. Maryam Hashemi Shabestari

Person: Academic

20122018

Research Output 2002 2020

Elementary Growth Modes provide a molecular description of cellular self-fabrication

de Groot, D. H., Hulshof, J., Teusink, B., Bruggeman, F. J. & Planqué, R., 1 Jan 2020, In : PLoS Computational Biology. 16, 1, e1007559.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Fabrication
phenotype
Growth
Phenotype
enzyme kinetics

Facilities that make the PDB data collection more powerful

Lange, J., Baakman, C., Pistorius, A., Krieger, E., Hooft, R., Joosten, R. P. & Vriend, G., 1 Jan 2020, In : Protein Science. 29, 1, p. 330-344 15 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Databases
Computational Biology
Proteins
Bioinformatics
Software

Microdroplet screening and selection for improved microbial production of extracellular compounds

van Tatenhove-Pel, R. J., Hernandez-Valdes, J. A., Teusink, B., Kuipers, O. P., Fischlechner, M. & Bachmann, H., Feb 2020, In : Current Opinion in Biotechnology. 61, p. 72-81 10 p.

Research output: Contribution to JournalReview articleAcademicpeer-review

Open Access
Fermentation
Screening
Emulsions
Throughput
Industry
Open Access
Growth
Metabolic Networks and Pathways
Saccharomyces cerevisiae
Theoretical Models
Adenosine Triphosphate

Adaption to glucose limitation is modulated by the pleotropic regulator CcpA, independent of selection pressure strength

Price, C. E., Branco Dos Santos, F., Hesseling, A., Uusitalo, J. J., Bachmann, H., Benavente, V., Goel, A., Berkhout, J., Bruggeman, F. J., Marrink, S. J., Montalban-Lopez, M., De Jong, A., Kok, J., Molenaar, D., Poolman, B., Teusink, B. & Kuipers, O. P., 10 Jan 2019, In : BMC Evolutionary Biology. 19, 1, p. 1-15 15 p., 15.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
strength (mechanics)
glucose
mutation
chemostat
fitness

Activities 2004 2017

  • 8 Lecture / Presentation
  • 1 Editorial work

Seeing the Trees through the Forest: Sequence-based Homo- and Heteromeric Protein-protein Interaction sites prediction using Random Forest

K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker), Wim F. Vranken (Speaker)
5 Apr 2017

Activity: Lecture / PresentationAcademic

CLUB-MARTINI: Selecting Favorable Interactions amongst Available Candidates, a Coarse-Grained Simulation approach to Scoring Docking Decoys

K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker), Marc F Lensink (Speaker)
19 Apr 2016

Activity: Lecture / PresentationAcademic

Advances in single molecule sequencing and applications

K.A. Feenstra (Speaker), W. Pirovano (Speaker)
24 Aug 2016

Activity: Lecture / PresentationAcademic

Predicting side chain mobility from sequence by DynaMine

K.A. Feenstra (Speaker), Wim F. Vranken (Speaker)
4 Feb 2015

Activity: Lecture / PresentationAcademic

Prizes

NWO Veni

Sanne Abeln (Recipient), 2011

PrizeAcademic

VICI personal grant

B. Teusink (Recipient), 1 Jan 2015

PrizeAcademic