Research Output 2002 2020

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Chapter
2018

Preface to Introduction to Structural Bioinformatics

Feenstra, K. A. & Abeln, S., 29 Jan 2018, Introduction to Structural Bioinformatics.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademic

File
2017

Introduction to Protein Structure Prediction

Abeln, S., Heringa, J. & Feenstra, K. A., 1 Dec 2017, (Submitted) Introduction to Structural Bioinformatics.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

File
Proteins

Multiple sequence alignment

Bawono, P., Dijkstra, M., Pirovano, W., Feenstra, A., Abeln, S. & Heringa, J., 2017, Methods in Molecular Biology: Volume I: Data, Sequence Analysis, and Evolution. Humana Press Inc, Vol. 1525. p. 167-189 23 p. (Methods in Molecular Biology; vol. 1525).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Sequence Alignment
Sequence Analysis
Proteins
Nucleotides
Research Personnel

Strategies for protein structure model generation

Abeln, S., Heringa, J. & Feenstra, K. A., 1 Dec 2017, (Submitted) Introduction to Structural Bioinformatics.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

File
Model structures
Proteins
Concretes
2011

A practical guide to genome-scale metabolic models and their analysis.

Santos, F., Boele, J. & Teusink, B., 2011, Methods in Enzymology. Jameson, D., Verma, M. & Westerhoff, H. V. (eds.). Burlington: Academic Press, p. 509-532 (Methods in Systems Biology; no. 500).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Melkzuurbacterien: Het spel tussen profiteurs en sukkels.

Teusink, B., 2011, Microcanon; wat je beslist moet weten over microbiologie.. De Wetenschappelijke Bibliotheek, natuurwetenschap en techniek (ed.). Diemen: Veen Magazines, p. 68-71

Research output: Chapter in Book / Report / Conference proceedingChapterPopular

2010

Multiple alignment of transmembrane protein sequences

Pirovano, W. A., Abeln, S., Feenstra, K. A. & Heringa, J., 2010, Structural Bioinformatics of Membrane Proteins. Frishman, D. (ed.). Vienna: Springer-Verlag, p. 103-122 400 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademic

2009

Chromosomal Breakpoint Detection in Human Cancer

Jong, C., Marchiori, E., Meijer, G. J., van der Vaart, A. W., Ylstra, B. & Weiss, M., 2009, Applications of Evolutionary Computing; Evolutionary Computation and Bioinformatics. Springer (ed.). p. 54-65 (Lectures Notes in Computer Science; no. 2611).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

2008

Cytochrome P450 Protein Modeling and Ligand Docking

Feenstra, K. A., de Graaf, C. & Vermeulen, N. P. E., 2008, Drug-Drug Interactions. Rodrigues, A. D. (ed.). New York: Informa Healthcare USA, Inc., p. 435-470 (Drugs and the pharmaceutical sciences; no. 179).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademic

2004

'28 entries in an Encyclopedia'

Heringa, J., 2004, Dictionary of bioinformatics and computational biology. Hancock, J. & Zvelebil, M. (eds.). Hoboken NJ - USA: John Wiley & Sons Inc, 636 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

A dictionary of programs for sequence analysis (Appendix 2)

Konopka, A. K. & Heringa, J., 2004, Compact handbook of computational biology.. Konopka, A. K. & Crabbe, M. J. C. (eds.). New York (NY - USA): Marcel Dekker, p. 503-536

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review