Center for Neurogenomics and Cognitive Research

2024

Amino-acyl tRNA synthetases associated with leukodystrophy

Engelen, M., van der Knaap, M. S. & Wolf, N. I., 2024, Inherited White Matter Disorders and Their Mimics. Lynch, D. S. & Houlden, H. (eds.). Elsevier B.V., p. 253-261 9 p. (Handbook of Clinical Neurology; vol. 204).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Genetics of neuroanatomy

Maciel, B. D. A. P. C., Heuvel, M. V. D. & Brouwer, R. M., 2024, Reference Module in Neuroscience and Biobehavioral Psychology.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

MRI pattern recognition in white matter disease

Wolf, N. I., Engelen, M. & van der Knaap, M. S., 2024, Inherited White Matter Disorders and Their Mimics. Lynch, D. S. & Houlden, H. (eds.). Elsevier B.V., p. 37-50 14 p. (Handbook of Clinical Neurology; vol. 204).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Vanishing white matter

van der Knaap, M. S., Bugiani, M. & Abbink, T. E. M., 2024, Inherited White Matter Disorders and Their Mimics. Lynch, D. S. & Houlden, H. (eds.). Elsevier B.V., p. 77-94 18 p. (Handbook of Clinical Neurology; vol. 204).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

2023

Advantages and limitations of hiPSC-derived neurons for the study of neurodegeneration

Mishra, S., Van Deursen, C., Robert, A., Van Der Kant, R. & Young, J. E., 2023, Phenotyping of Human iPSC-derived Neurons: Patient-Driven Research. Buttermore, E. D. (ed.). Elsevier, p. 243-261 19 p.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

2021

CLCN2-Related Leukoencephalopathy

Min, R., Depienne, C., Sedel, F., Abbink, GEM. & van der Knaap, MS., 20 May 2021, GeneReviews.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

2020

Genomics of Alzheimer’s disease

van de Weijer, M., Jansen, I., Verboven, A., Andreassen, O. & Posthuma, D., 2020, Personalized Psychiatry. Baune, B. T. (ed.). Academic Press, p. 275-283 9 p.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

2019

A combined cellomics and proteomics approach to uncover neuronal pathways to psychiatric disorder

Rosato, M., Gebuis, T., Paliukhovich, I., Stringer, S., Sullivan, P. F., Smit, A. B. & van Kesteren, R. E., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 199-215 17 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Data-Independent acquisition (SWATH) mass spectrometry analysis of protein content in primary neuronal cultures

Gonzalez-Lozano, M. A. & Koopmans, F., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 119-127 9 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Dissection of rodent brain regions: Guided free-hand slicing and dissection of frozen tissue

Spijker, S., Faliagkas, L. & Rao-Ruiz, P., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 7-19 13 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Open Access

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Integrated immunoprecipitation: Blue native gel electrophoresis—mass spectrometry for the identification of protein subcomplexes

van der Spek, S. J. F., Smit, A. B. & Pandya, N. J., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 85-94 10 p. (Neuromethods book series (NM); vol. 146).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Laser microdissection for spatial proteomics of postmortem brain tissue

Hondius, D. C., Hoozemans, J. J. M., Rozemuller, A. J. M. & Smit, A. B., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. New York, NY: Humana Press Inc, p. 43-53 11 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Neuroproteomics: The methods

Li, K. W., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 1-6 6 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Sample preparation for proteomics analysis: Filter-aided sample preparation (FASP) and single-pot solid-phase sample preparation (SP3)

Li, K. W., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 67-73 7 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Severe leukoencephalopathy with clinical recovery caused by recessive BOLA3 mutations

Stutterd, C. A., Lake, N. J., Peters, H., Lockhart, P. J., Taft, R. J., van der Knaap, M. S., Vanderver, A., Thorburn, D. R., Simons, C. & Leventer, R. J., 2019, JIMD Reports: Volume 43. Morava, E. (ed.). Springer, Vol. 43. p. 63-70 8 p. (JIMD Reports; vol. 43).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

The human connectome from an evolutionary perspective

Ardesch, D. J., Scholtens, L. H. & van den Heuvel, M. P., 2019, Evolution of the Human Brain: From Matter to Mind. Hofman, M. A. (ed.). Elsevier, p. 129-151 23 p. (Progress in Brain Research; vol. 250).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

TMT-MS³-Enabled proteomic quantification of human IPSC-Derived neurons

Pandya, N. J., Avila, D., Dunkley, T., Jagasia, R. & Tzouros, M., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 103-117 15 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

2018

Megalencephalic Leukoencephalopathy with Subcortical Cysts

van der Knaap, MS., Abbink, GEM. & Min, R., 29 Mar 2018, GeneReviews.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

A laser microdissection–liquid chromatography–tandem mass spectrometry workflow for post-mortem analysis of brain tissue

Hondius, D. C., Hoozemans, J. J. M., Rozemuller, A. J. M., Li, K. W. & Smit, A. B., 2018, Laser Capture Microdissection: Methods and Protocols. New York: Humana Press Inc, p. 371-383 13 p. (Methods in Molecular Biology; vol. 1723).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Neuronal life after death: electrophysiologic recordings from neurons in adult human brain tissue obtained through surgical resection or postmortem

Kramvis, I., Mansvelder, H. D. & Meredith, R. M., 2018, Brain Banking. Huitinga, I. & Webster, M. J. (eds.). Elsevier Science B.V., p. 319-333 15 p. (Handbook of Clinical Neurology; vol. 150).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Open Access

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Skin temperature, sleep, and vigilance

Te Lindert, B. H. W. & Van Someren, E. J. W., 2018, Handbook of Clinical Neurology: Thermoregulation: From Basic Neuroscience to Clinical Neurology Part I. Romanovsky, A. A. (ed.). Elsevier Science B.V., Vol. 1. p. 353-365 13 p. (Handbook of Clinical Neurology; vol. 156).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

2017

Complex Genetics of Behavior: BXDs in the Automated Home-Cage

Loos, M., Verhage, M., Spijker, S. & Smit, A. B., 2017, Systems Genetics: Methods and Protocols. Schughart, K. & Williams, R. W. (eds.). Humana Press, p. 519-530 12 p. (Methods in Molecular Biology; vol. 1488).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

2016

Regional homogeneity changes in amnestic mild cognitive impairment patients

Yuan, X., Han, Y., Wei, Y., Xia, M., Sheng, C., Jia, J. & He, Y., 26 Aug 2016, Neuroscience Letters. Elsevier Ireland Ltd, p. 1-8 8 p. (Neuroscience Letters; vol. 629).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Sleep Regulation and Insomnia

van Someren, E. J. W. & Cluydts, R., 2016, Neuroscience in the 21st Century: From Basic to Clinical. Pfaff, D. W. & Volkow, N. D. (eds.). New York: Springer Science + Business Media, p. 2289-2316

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Open Access

2015

AMPA receptor plasticity in retrieval, reconsolidation and post-retrieval extinction of memories

Rao, P., 2015, Novel mechanisms of memory. Giese, K. P. & Radwanska, K. (eds.). SpringerOpen, p. 21 41 p.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

Diminished vagal and/or increased sympathetic activity in Post-Traumatic Stress Disorder. pp. 1-15

Agorastos, A., Kellner, M., Baker, D. G. & Stiedl, O., 2015, Comprehensive Guide to Post-Traumatic Stress Disorder. Martin, C. R., Preedy, V. R. & Patel, V. B. (eds.). Switzerland: Springer International Publishing, p. 1-15

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Passive avoidance

Ogren, S. O. & Stiedl, O., 2015, Encyclopedia of Psychopharmacology. Stolerman, I. P. & Price, L. H. (eds.). 2nd ed. Berlin Heidelberg: Springer-Verlag, Vol. 2. p. 1220-1228 9 p.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

2014

Cerebral Organic Acidurias

Kolker, S., Struijs, E. A., van der Knaap, M. S. & Jakobs, C. A. J. M., 2014, Physician's Guide to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic Diseases. Berlin Heidelberg: Springer, p. 143-156

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Leukodytstophy overview

Vanderver, A., Tonduti, D., Schiffmann, R., Schmidt, J. & van der Knaap, M. S., 2014, GeneReviews® [Internet]. Pagon, R. A., Adam, M. P., Ardinger, H. H., Bird, T. D., Dolan, C. R., Fong, C. T., Smith, R. J. H. & Stephens, K. (eds.). Seattle (WA): University of Washington

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Neuronal Arborizations, Spatial Innervation, and Emergent Network Connectivity

van Pelt, J., Uylings, H. B. M. & van Ooijen, A., 2014, The Computing Dendrite. Cuntz, H., Remme, M. W. H. & Torben-Nielsen, B. (eds.). New York: Springer, p. 61-78 (Springer Series in Computational Neuroscience).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Vanishing white matter disease (CACH syndrome)

Scheper, G. C. & van der Knaap, M. S., 2014, Encyclopedia of the Neurological Sciences. Aminoff, M. F. & Daroff, R. B. (eds.). Oxford: Academic Press, p. 595-601

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

2013

Creativity and talent: Etiology of familial clustering

de Moor, M. H. M., Roeling, M. P. & Boomsma, D. I., 2013, Neuroscience of Creativity. Vartanian, O., Bristol, A. S. & Kaufman, J. C. (eds.). Cambridge: MIT, p. 95-112

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Effects of Light and Temperature on Sleep in Adults and the Elderly

van Someren, E. J. W., 2013, Encyclopedia of Sleep. Kushida, C. A. (ed.). Waltham: Academic Press, p. 177-182 6 p.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Imaging causes and consequences of insomnia and sleep complaints

van Someren, E. J. W., Altena, E., Ramauter, J. R., Stoffers, D., Benjamins, J. S., Moens, S., Hoo, E. Y., Hong, S. B. & van der Werf, Y. D., 2013, Neuroimgaging of Sleep and Sleep Disorders. Nofzinger, E., Maquet, P. & Thorpy, M. J. (eds.). Cambridge: Cambridge University Press, p. 187-196

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Persoonlijkheid en persoonlijkheidsstoornissen

Distel, M. A., de Moor, M. H. M. & Polderman, T. J. C., 2013, Handboek Psychiatrie en Genetica. Claes, S. & van Os, J. (eds.). Utrecht: De Tijdstroom, p. 105-119 223 p.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Sleep regulation and insomnia

van Someren, E. J. W. & Cluydts, R., 2013, Neuroscience in the 21st Century. From Basic to Clinical. Pfaff, D. W. (ed.). New York: Springer, p. 1889-1916

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

2012

Childhood Ataxia with Central Nervous System Hypomyelination / Vanishing White Matter

Schiffmann, R., Fogli, A., van der Knaap, M. S. & Boespflug-Tanguy, O., 2012, GeneReviews™ at GeneTests: Medical Genetics information Resource. Pagon, R. A., Bird, T. D., Dolan, C. R., Stephens, K. & Adam, M. P. (eds.). Seattle, WA: University of Washington, 18 p.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

2011

A 1D-PAGE/LC-ESI Linear Ion Trap Orbitrap MS Approach

Cheng, N., van der Schors, R. C. & Smit, A. B., 2011, Neuroproteomics. Li, K. W. (ed.). New York/Heidelberg: Humana Press, p. 159-168 317 p. (Neuromethods; no. 57).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Actigraphic monitoring of sleep and circadian rhythms

van Someren, E. J. W., 2011, Sleep disorders. Montagna, P. & Chokroverty, S. (eds.). Amsterdam: Elsevier, p. 55-63 (Handboook of clinical Neurology; no. 98).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Age-Related Changes in Thermoreception and Thermoregulation

van Someren, E. J. W., 2011, Handbook of the Biology of Aging, 7th edition. Masoro, E. & Austad, S. (eds.). Amsterdam: Elsevier, p. 463-478

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Bioinformatics Procedures for Analysis of Quantitative Proteomics

van Nierop, P. & Loos, M., 2011, Neuroproteomics. Li, K. W. (ed.). New York/Heidelberg: Humana Press, p. 275-296 317 p. (Neuromethods; no. 57).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Dissection of Rodent Brain Regions

Spijker, S., 2011, Neuroproteomics. Li, K. W. (ed.). New York/Heidelberg: Humana Press, p. 23-26 317 p. (Neuromethods; no. 57).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

High-Throughput High-Content Functional Image Analysis

Blaas, E. & van Kesteren, R. E., 2011, Neuroproteomics. Li, K. W. (ed.). New York/Heidelberg: Humana Press, p. 211-227 317 p. (Neuromethods; no. 57).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Logitudinal assessment of deliberate mouse behaviorin the home cage and atttached environments: relevance to anxiety and mood disorders

Kas, M. J., Golani, I., Benjamini, Y. & Stiedl, O., 2011, Mood and Anxiety Related Phenotypes in mice: Characterization Using Behavioral Test, Volume II. Gould, TD. (ed.). Berlin: Springer, p. 1-20 (Neuromethods; no. 63).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Neuroproteomics: Deciphering Brain Function and Disorders

Li, K. W., 2011, Neuroproteomics. Li, K. W. (ed.). New York/Heidelberg: Human Press, p. 3-9 317 p. (Neuromethods; no. 57).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

SDS-PAGE Immunoblot Analysis

Klemmer, P., 2011, Neuroproteomics. Li, K. W. (ed.). New York/Heidelberg: Humana Press, p. 169-180 317 p. (Neuromethods; no. 57).

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

2010

Witte, S. M., Negrean, A., Lodder, J. C., Testa-Silva, G., de Kock, C. P. J., Mansvelder, H. D. & Groot, M. L., 2010, Ultrafast Phenomena XVII: Proceedings of the 17th International Conference. Chergui, M. (ed.). New York: Oxford University press, p. 871-873 952 p.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Passive avoidance

Ögren, S. O. & Stiedl, O., 2010, Encyclopedia of Psychopharmacology. Stolerman, I. P. (ed.). Berlin: Springer, Vol. 2. p. 960-967 8 p.

Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

Center for Neurogenomics and Cognitive Research

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