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Research Output 1971 2019

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2019

Anton Pannekoek as a Pioneer in the Sociology of Knowledge

Karstens, B., 2019, (Accepted/In press) Anton Pannekoek (1873-1960): Ways of Viewing Science and Society. Van der Steen, B. & Tai, C. (eds.). Amsterdam University Press

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

The Impact of Russian Formalism on Linguistic Structuralism

Karstens, B., 2019, (Accepted/In press) Form and Formalism in Linguistics. McElvenny, J. (ed.). Berlin: Language Science Press

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access
2018

A brief introduction to single-molecule fluorescence methods

van den Wildenberg, S. M. J. L., Prevo, B. & Peterman, E. J. G., 2018, Single Molecule Analysis: Methods and Protocols. Humana Press Inc, p. 93-113 21 p. (Methods in Molecular Biology; vol. 1665)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Fluorescence Microscopy
Fluorescence
Fluorescence Polarization
Biological Science Disciplines
Energy Transfer

Adaptations in water harvesting technologies for enhancing food security and livelihood: A multi-country study in Sub-Saharan Africa

Snelder, D., Kahimba, F., Korodjouma, O., Abebe, A., Oughton, E., Bunclark, L. & Lasage, R., 2018, Rainwater-Smart Agriculture in Arid and Semi-Arid Areas: Fostering the Use of Rainwater for Food Security, Poverty Alleviation, Landscape Restoration and Climate Resilience. Leal Filho, W. & de Trincheria Gomez, J. (eds.). Springer International Publishing Switzerland, p. 95-119 25 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access
water harvesting
Food Supply
Africa South of the Sahara
Sub-Saharan Africa
livelihood

A laser microdissection–liquid chromatography–tandem mass spectrometry workflow for post-mortem analysis of brain tissue

Hondius, D. C., Hoozemans, J. J. M., Rozemuller, A. J. M., Li, K. W. & Smit, A. B., 2018, Laser Capture Microdissection: Methods and Protocols. New York: Humana Press Inc, p. 371-383 13 p. (Methods in Molecular Biology; vol. 1723)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Microdissection
Workflow
Tandem Mass Spectrometry
Liquid Chromatography
Lasers

All solutions to an operator nevanlinna-pick interpolation problem

Frazho, A. E., ter Horst, S. & Kaashoek, M. A., 2018, Operator Theory: Advances and Applications. Springer International Publishing Switzerland, p. 139-220 82 p. (Operator Theory: Advances and Applications; vol. 262)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Nevanlinna-Pick Interpolation
Interpolation Problem
Operator
Commutant
Strictly positive

Anaerobic methanotrophic communities thrive in deep submarine permafrost

Winkel, M., Mitzscherling, J., Overduin, P. P., Horn, F., Winterfeld, M., Rijkers, R., Grigoriev, M. N., Knoblauch, C., Mangelsdorf, K., Wagner, D. & Liebner, S., 1 Dec 2018, Scientific Reports. Nature Publishing Group, (Scientific Reports; vol. 8)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Methane
Archaea
Permafrost
Sulfates
Euryarchaeota

Analysis of metabolites from the tricarboxylic acid cycle for yeast and bacteria samples using gas chromatography mass spectrometry

Seifar, R. M., ten Pierick, A. & van Dam, P. T. N., 2018, Clinical Metabolomics: methods and protocols. Giera, M. (ed.). Humana Press Inc, p. 277-282 6 p. (Methods in Molecular Biology; vol. 1730)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Citric Acid Cycle
Gas Chromatography-Mass Spectrometry
Yeasts
Bacteria
Fumarates

Architectural Technical Debt Identification: Moving Forward

Verdecchia, R., 13 Aug 2018, Proceedings of the 2018 IEEE 15th International Conference on Software Architecture Companion, ICSA-C 2018. Institute of Electrical and Electronics Engineers Inc., p. 43-44 2 p. 8432173. (Proceedings - 2018 IEEE 15th International Conference on Software Architecture Companion, ICSA-C 2018)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Architectural design
Deterioration
Costs

A short presentation of CLUmondo

van Vliet, J. & Verburg, P. H., 2018, Geomatic Approaches for Modeling Land Change Scenarios. Olmedo, M. T. C., Paegelow, M., Mas, J-F. & Escobar, F. (eds.). Springer, p. 485-492 8 p. (Lecture Notes in Geoinformation and Cartography)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Assessment and Adaptation to Climate Change-Related Floods Risks

Jongman, B., Winsemius, H. C., Fraser, S., Muis, S. & Ward, P. J., 2018, Oxford Encyclopedia of Natural Hazard Science. Oxford, UK: Oxford University Press, p. 1-29 29 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

climate change
flooding
damage
floodplain
population growth

A Structural Framework for GPCR Chemogenomics: What’s In a Residue Number?

Vass, M., Kooistra, A. J., Verhoeven, S., Gloriam, D., de Esch, I. J. P. & de Graaf, C., 2018, Computational Methods for GPCR Drug Discovery. Heifetz, A. (ed.). Humana Press Inc, p. 73-113 41 p. (Methods in Molecular Biology; vol. 1705)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

G-Protein-Coupled Receptors
Binding Sites
Ligands
Workflow
Mutation

Basics of sensory data

Hoogendoorn, M. & Funk, B., 1 Jan 2018, Machine Learning for the Quantified Self: On the Art of Learning from Sensory Data. Springer/Verlag, p. 15-24 10 p. (Cognitive Systems Monographs; vol. 35)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Learning systems
Sensors

Biomass conversion at population level

Kooijman, S. A. L. M., 2018, Individual-Based Models and Approaches in Ecology: Populations, Communities and Ecosystems. CRC Press, p. 338-358 21 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Biomass
Predator
Prey
Harvesting
Energy

Clustering

Hoogendoorn, M. & Funk, B., 1 Jan 2018, Machine Learning for the Quantified Self: On the Art of Learning from Sensory Data. Springer/Verlag, p. 73-100 28 p. (Cognitive Systems Monographs; vol. 35)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Co-cultivation of the strictly anaerobic methanogen Methanosarcina barkeri with aerobic methanotrophs in an oxygen-limited membrane bioreactor

in ’t Zandt, M. H., van den Bosch, T. J. M., Rijkers, R., van Kessel, M. A. H. J., Jetten, M. S. M. & Welte, C. U., 1 Jul 2018, Applied Microbiology and Biotechnology. Springer/Verlag, p. 5685-5694 10 p. (Applied Microbiology and Biotechnology; vol. 102)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

bioreactor
methane
membrane
oxygen
acetate

Comparing and aligning process representations

Van Der Aa, H., 2018, BPMTracks 2018 - BPM 2018 Dissertation Award, Demonstration, and Industrial Track: Proceedings of the Dissertation Award, Demonstration, and Industrial Track at BPM 2018, co-located with 16th International Conference on Business Process Management (BPM 2018). p. 16-20 5 p. (CEUR Workshop Proceedings; vol. 2196)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Industry
Compliance

Conclusion: towards a ‘deep debate’ on the Anthropocene

Hickmann, T., Partzsch, D. R., Pattberg, P. H. & Weiland, S., 5 Sep 2018, The Anthropocene Debate and Political Science. Abingdon: Routledge, p. 237 251 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Directed locomotion for modular robots with evolvable morphologies

Lan, G., Jelisavcic, M., Roijers, D. M., Haasdijk, E. & Eiben, A. E., 2018, Parallel Problem Solving from Nature – PPSN XV: 15th International Conference, 2018, Proceedings. Fonseca, C. M., Lourenco, N., Machado, P., Paquete, L., Whitley, D. & Auger, A. (eds.). Springer/Verlag, Vol. 1, p. 476-487 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11101 LNCS)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access
File
Modular robots
Locomotion
Robot
Controllers
Trajectories

Discussion

Hoogendoorn, M. & Funk, B., 1 Jan 2018, Machine Learning for the Quantified Self: On the Art of Learning from Sensory Data. Springer/Verlag, p. 217-221 5 p. (Cognitive Systems Monographs; vol. 35)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Learning systems

Duurzame energietransitie door demonstratie

Bossink, B., Jan 2018, Adaptief Bestuur: Essays over adaptiviteit en openbaar bestuur. Mettau, P. & Hulsenboom, Z. (eds.). Den Haag: Ministerie van Binnenlandse Zaken en Koninkrijksrelaties, p. 100-113 14 p. (Publicaties; vol. 110379)

Research output: Chapter in Book / Report / Conference proceedingChapterProfessional

Open Access

Economic Impact Assessment of the Grand Ethiopian Renaissance Dam Under Different Climate and Hydrological Conditions

Kahsay, T. N., Kuik, O. J., Brouwer, R. & van der Zaag, P., 2018, The Grand Ethiopian Renaissance Dam and the Nile basin: Implications for Transboundary Water Cooperation. Yihdego, Z., Rieu-Clarke, A. & Cascao, A. E. (eds.). Earthscan/Routledge, p. 158-180 23 p. (Earthscan studies in Water Resource Management)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Handling noise and missing values in sensory data

Hoogendoorn, M. & Funk, B., 1 Jan 2018, Machine Learning for the Quantified Self: On the Art of Learning from Sensory Data. Springer/Verlag, p. 25-50 26 p. (Cognitive Systems Monographs; vol. 35)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Low pass filters
Kalman filters
Principal component analysis

Het KNMI en de wet van Buys Ballot

van Lunteren, F. H., 2018, Wereldgeschiedenis van Nederland. Amsterdam, p. 303-308

Research output: Chapter in Book / Report / Conference proceedingChapterProfessional

High-accuracy deep-UV ramsey-comb spectroscopy in krypton

Galtier, S., Altmann, R. K., Dreissen, L. S. & Eikema, K. S. E., Jan 2018, Exploring the World with the Laser: Dedicated to Theodor Hänsch on his 75th Birthday. Springer International Publishing Switzerland, p. 207-224 18 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access
Krypton
krypton
Isotopes
Spectroscopy
Atomic beams

High-precision spectroscopy of the HD+ molecule at the 1-p.p.b. level

Biesheuvel, J., Karr, J. P., Hilico, L., Eikema, K. S. E., Ubachs, W. & Koelemeij, J. C. J., Jan 2018, Exploring the World with the Laser: Dedicated to Theodor Hänsch on his 75th Birthday. Cham: Springer International Publishing Switzerland, p. 267-307 41 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access
molecular theory
Spectroscopy
Ions
deviation
Molecules

How Do Climate Change and Energy-related Partnerships Impact Innovation and Technology Transfer? Some Lessons for the Implementation of the UN Sustainable Development Goals

Pattberg, P. H. & Mert, A., 2018, The Cambridge Handbook of Public-Private Partnerships, Intellectual Property Governance and Sustainable Development. Chon, M., Roffe, P. & Abdel-Latif, A. (eds.). Cambridge: Cambridge University Press, p. 289-307 18 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

ICSA 2018: Engineering Track: Message from the Chairs

Sangwan, R. S. & De Graaf, K. A., 13 Aug 2018, Proceedings of the 2018 IEEE International Conference on Software Architecture Companion (ICSA-C) . IEEE, p. 76-76 1 p. (Proceedings - 2018 IEEE 15th International Conference on Software Architecture Companion, ICSA-C 2018)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Software architecture
Innovation

Introduction: a political science perspective on the Anthropocene

Hickmann, T., Partzsch, D. R., Pattberg, P. H. & Weiland, S., 5 Sep 2018, The Anthropocene Debate and Political Science. Abingdon: Routledge, p. 1 13 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Introduction to optical tweezers: Background, system designs, and commercial solutions

van Mameren, J., Wuite, G. J. L. & Heller, I., 1 Jan 2018, Single Molecule Analysis: Methods and Protocols. Humana Press Inc, p. 3-23 21 p. (Methods in Molecular Biology; vol. 1665)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Optical Tweezers
Biological Phenomena
Optical Devices
Physics
Calibration

Laboratorium - Het gezag van het experiment

van Lunteren, F. H., 2018, Leerboek medische geschiedenis. Hillen, H. F. P., Houwaart, E. S. & Huisman, F. G. (eds.). Houten: Bohn Stafleu Van Loghum, p. 95-108 14 p.

Research output: Chapter in Book / Report / Conference proceedingChapterProfessional

Experiment
Revolution
Authority
Medicine

Lessons and challenges in land change modeling derived from synthesis of cross-case comparisons

Pontius Jr., R. G., Castella, J. C., de Nijs, T., Duan, Z., Fotsing, E., Goldstein, N., Kok, K., Koomen, E., Lippitt, C. D., McConnel, W., Mohd Sood, A., Pijanowski, B. C., Verburg, P. H. & Veldkamp, A. T., 2018, Trends in spatial analysis and modelling. Behnisch, M. & Meine, G. (eds.). Cham: Springer International Publishing AG, p. 143-164 22 p. (Geotechnologies and the Environment; vol. 19)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

modeling
learning
calibration
land
comparison

Linkages: Understanding Their Role in Polycentric Governance

Pattberg, P. H., Chan, S., Sanderink, L. & Widerberg, O. E., 2018, Governing Climate Change: Polycentricity in Action?. Jordan, A., Huitema, D., van Asselt, H. & Forster, J. (eds.). Cambridge: Cambridge University Press, p. 169-187 19 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access

Neuronal life after death: electrophysiologic recordings from neurons in adult human brain tissue obtained through surgical resection or postmortem

Kramvis, I., Mansvelder, H. D. & Meredith, R. M., 2018, Brain Banking. Elsevier Science B.V., p. 319-333 15 p. (Handbook of Clinical Neurology; vol. 150)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Neurons
Brain
Autopsy
Neurophysiology
Temporal Lobe

Precision measurements and test of molecular theory in highly excited vibrational states of H2 (Ν = 11)

Trivikram, T. M., Niu, M. L., Wcisło, P., Ubachs, W. & Salumbides, E. J., Jan 2018, Exploring the World with the Laser: Dedicated to Theodor Hänsch on his 75th Birthday. Cham: Springer International Publishing Switzerland, p. 679-700 22 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access
molecular theory
vibrational states
Electron energy levels
Rydberg states
Photodissociation

Predictive modeling with notion of time

Hoogendoorn, M. & Funk, B., 1 Jan 2018, Machine Learning for the Quantified Self: On the Art of Learning from Sensory Data. Springer/Verlag, p. 167-202 36 p. (Cognitive Systems Monographs; vol. 35)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Recurrent neural networks
Supervised learning
Time series
Dynamical systems

Predictive modeling without notion of time

Hoogendoorn, M. & Funk, B., 1 Jan 2018, Cognitive Systems Monographs. Springer/Verlag, Vol. 35, p. 123-165 43 p. (Cognitive Systems Monographs; vol. 35)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Feedforward neural networks
Supervised learning
Decision trees
Support vector machines
Feature extraction

Preface to Introduction to Structural Bioinformatics

Feenstra, K. A. & Abeln, S., 29 Jan 2018, Introduction to Structural Bioinformatics.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademic

File

Quantitative analysis of kelvin probe force microscopy on semiconductors

Polak, L. & Wijngaarden, R. J., 10 Mar 2018, Kelvin Probe Force Microscopy: From Single Charge Detection to Device Characterization. Cham: Springer/Verlag, p. 227-247 21 p. (Springer Series in Surface Sciences; vol. 65)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access
Microscopic examination
Semiconductor materials
Surface charge
Chemical analysis
Surface states

Reinforcement learning to provide feedback and support

Hoogendoorn, M. & Funk, B., 1 Jan 2018, Machine Learning for the Quantified Self: On the Art of Learning from Sensory Data. Springer/Verlag, p. 203-214 12 p. (Cognitive Systems Monographs; vol. 35)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Reinforcement learning
Feedback
Sensors

Remembering Leiba Rodman 1949–2015, at IWOTA 2015

Ball, J. A., Kaashoek, M. A., Ran, A. C. M. & Spitkovsky, I. M., 2018, Operator Theory: Advances and Applications. Springer International Publishing Switzerland, p. 3-12 10 p. (Operator Theory: Advances and Applications; vol. 262)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Cover

River Landscapes in the Dijle Catchment: From Natural to Anthropogenic Meandering Rivers

Verstraeten, G., Notebaert, B., Broothaerts, N., Vandenberghe, J. & De Smedt, P., 2018, Landscapes and Landforms of Belgium and Luxembourg. Demoulin, A. (ed.). Springer_Verlag, p. 269-280 12 p. (World Geomorphological Landscapes)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Caledonian orogeny
Hercynian orogeny
quarry
metamorphic rock
sedimentary rock

Single-molecule fluorescence microscopy in living Caenorhabditis elegans

van Krugten, J. & Peterman, E. J. G., 2018, Single Molecule Analysis: Methods and Protocols. Humana Press Inc, p. 145-154 10 p. (Methods in Molecular Biology; vol. 1665)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Caenorhabditis elegans
Fluorescence Microscopy
Cilia
Molecular Dynamics Simulation
Organelles

Single-molecule imaging of Escherichia coli transmembrane proteins

Varadajan, A., Oswald, F. & Bollen, Y. J. M., 2018, Methods in Molecular Biology. Peterman, E. (ed.). Humana Press Inc, Vol. 1665, p. 135-144 10 p. (Methods in Molecular Biology; vol. 1665)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Escherichia coli Proteins
Biological Phenomena
Cell Fusion
Gram-Negative Bacteria
Fluorescence Microscopy

Single-molecule measurements using acoustic force spectroscopy (AFS)

Kamsma, D. & Wuite, G. J. L., Jan 2018, Methods in Molecular Biology. New York, NY: Humana Press Inc, p. 341-351 11 p. (Methods in Molecular Biology; vol. 1665)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Acoustics
Spectrum Analysis

SlideWiki - A platform for authoring FAIR educational content

Khalili, A. & De Graaf, K. A., 2018, SEMPDS 2018. Posters&Demos at SEMANTiCS 2018: Proceedings of the Posters and Demos Track of the 14th International Conference on Semantic Systems co-located with the 14th International Conference on Semantic Systems (SEMANTiCS 2018). Khalili, A. & Koutraki, M. (eds.). Vol. 2198, p. 1-4 4 p. (CEUR Workshop Proceedings; vol. 2198)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Metadata

SlideWiki - Towards a collaborative and accessible platform for slide presentations

Elias, M., James, A., Ruckhaus, E., Suárez-Figueroa, M. C., De Graaf, K. A., Khalili, A., Wulff, B., Lohmann, S. & Auer, S., 2018, EC-TEL 2018. EC-TEL Practitioner Proceedings 2018: EC-TEL Practitioner Proceedings 2018: 13th European Conference On Technology Enhanced Learning. Leeds, UK, September 3-6, 2018. Dimitrova, V., Praharaj, S., Fominykh, M. & Drachsler, H. (eds.). p. 1-3 13 p. (CEUR Workshop Proceedings; vol. 2193)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Feedback
Learning systems
Scalability
Teaching

SMIL: Synchronized multimedia integration language

Bulterman, D. C. A., 27 Mar 2018, MediaSync: Handbook on Multimedia Synchronization. Springer International Publishing Switzerland, p. 359-385 27 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

CD-ROM
Synchronization
Servers
Scheduling
Bandwidth

Tectonic control on the Early Cretaceous Bentheim Sandstone sediments in the Schoonebeek oil field, The Netherlands

Vis, G. J., Smoor, W. D., Rutten, K. W., Jager, J. D. & Mijnlieff, H. F., 15 Mar 2018, Mesozoic Resource Potential in the Southern Permian Basin. 1 ed. Geological society of London, p. 435-455 21 p. (Geological Society Special Publication; vol. 469, no. 1)

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Tectonics
Oil fields
Sandstone
oil field
Sediments

The Netherlands

van Teeffelen, A., 2018, Biodiversity offsets: European Perspectives on No Net Loss of Biodiversity and Ecosystem Services. Wende, W., Tucker, G., Quétier, F., Rayment, M. & Darbi, M. (eds.). Cham: Springer International Publishing Switzerland, p. 191-209 19 p.

Research output: Chapter in Book / Report / Conference proceedingChapterProfessional

natural resources conservation
nature conservation
Netherlands
mitigation
planning