• De Boelelaan 1081 , W&N building

    1081 HV Amsterdam

    Netherlands

Research Output 1935 2020

Filter
Chapter
2019

A combined cellomics and proteomics approach to uncover neuronal pathways to psychiatric disorder

Rosato, M., Gebuis, T., Paliukhovich, I., Stringer, S., Sullivan, P. F., Smit, A. B. & van Kesteren, R. E., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 199-215 17 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Proteomics
Psychiatry
Genes
Inborn Genetic Diseases
Cytology

A Multimodal Chatbot System for Enhancing Social Skills Training for Security Guards

de Bever, S., Formolo, D., Wang, S. & Bosse, T., Jul 2019, A Multimodal Chatbot System for Enhancing Social Skills Training for Security Guards. p. 499-513 15 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

A Note on Adrienne Mayor’s Gods and Robots

Koetsier, T., 1 Jan 2019, Mechanisms and Machine Science. Springer Netherlands, p. 1187-1196 10 p. (Mechanisms and Machine Science; vol. 73).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Robots

A protocol for one-step differentiation of human induced pluripotent stem cells into mature podocytes

Murphy, C., Feifel, E., Jennings, P., Gstraunthaler, G. & Wilmes, A., 1 Jan 2019, Cell-Based Assays Using iPSCs for Drug Development and Testing. Mandenius, C. F. & Ross, J. (eds.). Humana Press Inc., Vol. 1994. p. 93-99 7 p. (Methods in Molecular Biology; vol. 1994).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Induced Pluripotent Stem Cells
Podocytes
Glomerular Filtration Barrier
Cell Culture Techniques
Epithelial Cells

A toeplitz-like operator with rational symbol having poles on the unit circle II: The spectrum

Groenewald, G. J., ter Horst, S., Jaftha, J. & Ran, A. C. M., 1 Jan 2019, Interpolation and Realization Theory with Applications to Control Theory: In honor of Joe Ball. Bolotnikov, V., ter Horst, S., Ran, A. C. M. & Vinnikov, V. (eds.). Springer International Publishing AG, p. 133-154 22 p. (Operator Theory: Advances and Applications; vol. 272).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Essential Spectrum
Otto Toeplitz
Unit circle
Pole
Continuous Spectrum

Cation affinities throughout the periodic table

Boughlala, Z., Fonseca Guerra, C. & Bickelhaupt, F. M., 2019, Computational Chemistry. van Eldik, R. & Puchta, R. (eds.). Academic Press Inc., p. 123-158 36 p. (Advances in Inorganic Chemistry; vol. 73).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Cations
Lewis Bases
Alkali Metals
Molecular orbitals
Hydrides

Comparing Yields: Organic Versus Conventional Agriculture

Seufert, V., 2019, Encyclopedia of Food Security and Sustainability. Elsevier, Vol. 3. p. 196–208

Research output: Chapter in Book / Report / Conference proceedingChapterAcademic

agriculture
organic production
agricultural research
cropping systems
farming systems

Current and Potential Contributions of Organic Agriculture to Diversification of the Food Production System

Seufert, V., Mehrabi, Z., Gabriel, D. & Benton, T. G., 2019, Agroecosystem Diversity: Reconciling Contemporary Agriculture and Environmental Quality. Lemaire, G., De Faccio Carvalho, P. C., Kronberg, S. & Recous, S. (eds.). London: Academic Press, p. 435-452

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Data-Independent acquisition (SWATH) mass spectrometry analysis of protein content in primary neuronal cultures

Gonzalez-Lozano, M. A. & Koopmans, F., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 119-127 9 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Mass spectrometry
Mass Spectrometry
Peptides
Proteins
Proteome

Dissection of rodent brain regions: Guided free-hand slicing and dissection of frozen tissue

Spijker, S., Faliagkas, L. & Rao-Ruiz, P., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 7-19 13 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Dissection
Rodentia
Brain
Hand
Tissue

Distributing Water Between Competing Users in the Netherlands

Koopman, J. F. L., Kuik, O., Tol, R. S. J., van der Vat, M. P., Hunink, J. C. & Brouwer, R., 7 Feb 2019, Economy-Wide Modeling of Water at Regional and Global Scales. Wittwer, G. (ed.). Singapore: Springer, p. 159-192 34 p. (Advances in Applied General Equilibrium Modeling).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademic

Empowerment and disempowerment of urban climate change initiatives: An exploratory typology of mechanisms

Patterson, J. J. & van der Grijp, N. M., 2019, (Accepted/In press) Urban Climate Politics: Agency and Empowerment. Cambridge: Cambridge University Press.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Fetal toxicology

van de Bor, M., 2019, Handbook of Clinical Neurology. Elsevier Science B.V., p. 31-55 25 p. (Handbook of Clinical Neurology; vol. 162).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Pesticides
Halogenated Diphenyl Ethers
Toxicology
Organophosphates
Poisons

Hybrid accountability in cooperative initiatives for global climate governance

Widerberg, O. E., Pattberg, P. H. & Brouwer, L., 15 Feb 2019, Global Environmental Governance and the Accountability Trap. Park, S. & Kramarz, T. (eds.). Cambridge, MA: MIT Press, p. 121-142 21 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Improving flood preparedness through insurance incentives

Botzen, W., 2019, The Future of Risk Management. Kunreuther, H., Meyer, B. & Michel-Kerjan, E. (eds.). The University of Pennsylvania Press

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Inductively coupled plasma mass Spectrometry in biodistribution studies of (engineered) nanoparticles (update)

Krystek, P., Cirtiu, C. M., Park, M., Braakhuis, H. & de Jong, W. H., 20 Jan 2019, (Accepted/In press) Encyclopedia of Analytical Chemistry. John Wiley & Sons, Inc.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Integrated disaster risk management and adaptation

Botzen, W. J. W., Bouwer, L. M., Scussolini, P., Kuik, O. J., Haasnoot, M., Lawrence, J. & Aerts, J. C. J. H., 2019, Loss and Damage from Climate Change: Concepts, Methods and Policy Options. Mechler, R., Bouwer, L. M., Schinko, S., Surminski, S. & Linnerooth-Bayer, J. (eds.). Springer, p. 287-315 29 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

disaster
climate change
weather
United Nations Framework Convention on Climate Change
assessment method

Integrated immunoprecipitation: Blue native gel electrophoresis—mass spectrometry for the identification of protein subcomplexes

van der Spek, S. J. F., Smit, A. B. & Pandya, N. J., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 85-94 10 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Immunoprecipitation
Spectrometry
Spectrum Analysis
Gels
Proteins

Large palaeomeanders in Europe: distribution, formation process, age, environments and significance.

Vandenberghe, J. & Sidorchuk, A., 29 Jun 2019, Palaeohydrology: Geography of the Physical Environment. Herget, J. & Fontana, A. (eds.). Springer_Verlag, p. 169-186 (Geography of the Physical Environment).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Linked Open Data Validity -- A Technical Report from ISWS 2018: A Decentralized Approach to Validating Personal Data Using a Combination of Blockchains and Linked Data

Bucur, C. I., Ciroku, F., Makhalova, T., Rizza, E., Thanapalasingam, T., Varanka, D., Wolowyk, M. & Domingue, J., 2019, Linked Open Data Validity -- A Technical Report from ISWS 2018: A Decentralized Approach to Validating Personal Data Using a Combination of Blockchains and Linked Data. p. 88-97 10 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademic

HTTP
Data privacy
Semantic Web
Information retrieval
Speech recognition

Metabolic pathways and optimisation

Planqué, R. & Hulshof, J., 20 Mar 2019, Complexity Science: An Introduction. World Scientific Publishing Co. Pte Ltd, p. 375-392 18 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Pathway
Optimization
Yeast
Bacteria
Adaptive Control

Multicomponent ion exchange and chromatography in natural systems

Appelo, C. A. J., 26 Feb 2019, Reactive Transport in Porous Media. Walter de Gruyter GmbH, p. 193-227 35 p. (Reviews in Mineralogy & Geochemistry; vol. 34).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Neuroproteomics: The methods

Li, K. W., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 1-6 6 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Neurology
Proteome
Proteomics
Nervous System
Research

New U–PB baddeleyite ages of mafic dyke swarms of the west African and amazonian cratons: Implication for their configuration in supercontinents through time

Baratoux, L., Söderlund, U., Ernst, R. E., de Roever, E., Jessell, M. W., Kamo, S., Naba, S., Perrouty, S., Metelka, V., Yatte, D., Grenholm, M., Diallo, D. P., Ndiaye, P. M., Dioh, E., Cournède, C., Benoit, M., Baratoux, D., Youbi, N., Rousse, S. & Bendaoud, A., 2019, Dyke Swarms of the World: A Modern Perspective. Srivastava, R. K., Ernst, R. E. & Peng, P. (eds.). Springer, p. 263-314 52 p. (Springer Geology).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

baddeleyite
dike swarm
supercontinent
craton
large igneous province

Sample preparation for proteomics analysis: Filter-aided sample preparation (FASP) and single-pot solid-phase sample preparation (SP3)

Li, K. W., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 67-73 7 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Proteomics
Gels
Experiments

Science for Loss and Damage: Findings and Propositions

Mechler, R., Calliari, E., Bouwer, L. M., Schinko, T., Surminski, S., Linnerooth-Bayer, J., Aerts, J. C. J. H., Botzen, W. & et al., 2019, Loss and Damage from Climate Change. Mechler, R., Bouwer, L., Schinko, T., Surminski, S. & Linnerooth-Bayer, J. (eds.). Springer

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Science to Bring the Nation Together: The Formation of Nomadic Congresses in the Netherlands and Flanders

Nieuwland, I. J. J., 1 Jun 2019, Locations of Knowledge in Dutch Contexts. Leiden: Brill, p. 1-22 22 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Seismic noise and gravity-gradient noise

Van Den Brand, J., 1 Jan 2019, Advanced Interferometric Gravitational-Wave Detectors: In 2 Volumes. World Scientific Publishing Co., Vol. 1. p. 161-184 24 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

gravitation
gradients
detectors
gravitational waves

Severe leukoencephalopathy with clinical recovery caused by recessive BOLA3 mutations

Stutterd, C. A., Lake, N. J., Peters, H., Lockhart, P. J., Taft, R. J., van der Knaap, M. S., Vanderver, A., Thorburn, D. R., Simons, C. & Leventer, R. J., 2019, JIMD Reports. Morava, E. (ed.). Springer, p. 63-70 8 p. (JIMD Reports; vol. 43).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Leukoencephalopathies
Fibroblasts
Magnetic resonance imaging
Recovery
Mutation

Smart mixes and the challenge of complexity: the example of global climate governance

Pattberg, P. H. & Widerberg, O. E., Mar 2019, Smart Mixes for Transboundary Environmental Harm. van Erp, J., Faure, M., Nollkaemper, A. & Philipsen, N. (eds.). Cambridge: Cambridge University Press, p. 49 68 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

The fossil record of biodiversity in angola through time: A paleontological perspective

Mateus, O., Callapez, P. M., Polcyn, M. J., Schulp, A. S., Gonçalves, A. O. & Jacobs, L. L., 2019, Biodiversity of Angola: Science and Conservation: A Modern Synthesis. Huntley, B. J., Russo, V., Lages, F. & Ferrand, N. (eds.). Springer International Publishing AG, p. 53-76 24 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Angola
Biodiversity
fossil record
fossils
biodiversity

The Impact of Russian Formalism on Linguistic Structuralism

Karstens, B., 2019, (Accepted/In press) Form and Formalism in Linguistics. McElvenny, J. (ed.). Berlin: Language Science Press

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access

The twofold ellis–gohberg inverse problem in an abstract setting and applications

ter Horst, S., Kaashoek, M. A. & van Schagen, F., 2019, Interpolation and Realization Theory with Applications to Control Theory: In honor of Joe Ball. Bolotnikov, V., ter Horst, S., Ran, A. C. M. & Vinnikov, V. (eds.). Springer International Publishing AG, p. 155-212 58 p. (Operator Theory: Advances and Applications; vol. 272).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Inverse Problem
Hankel Operator
Operator Matrix
Inversion Formula
Block Matrix

TMT-MS3-Enabled proteomic quantification of human IPSC-Derived neurons

Pandya, N. J., Avila, D., Dunkley, T., Jagasia, R. & Tzouros, M., 2019, Neuroproteomics. Li, K. W. (ed.). 2nd ed. Humana Press Inc., p. 103-117 15 p. (Neuromethods; vol. 146).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Induced Pluripotent Stem Cells
Stem cells
Proteomics
Neurons
Workflow

Towards GIM, the global intelligent machine

Koetsier, T., 2019, Explorations in the History and Heritage of Machines and Mechanisms: Proceedings of the 2018 HMM IFToMM Symposium on History of Machines and Mechanisms. Springer, p. 296-309 14 p. (History of Mechanism and Machine Science; vol. 37).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Machinery
Brain
Robotics
Actuators
Sensors
2018

A brief introduction to single-molecule fluorescence methods

van den Wildenberg, S. M. J. L., Prevo, B. & Peterman, E. J. G., 2018, Single Molecule Analysis: Methods and Protocols. Humana Press Inc, p. 93-113 21 p. (Methods in Molecular Biology; vol. 1665).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademic

Fluorescence Microscopy
Fluorescence
Fluorescence Polarization
Biological Science Disciplines
Energy Transfer

Adaptations in water harvesting technologies for enhancing food security and livelihood: A multi-country study in Sub-Saharan Africa

Snelder, D., Kahimba, F., Korodjouma, O., Abebe, A., Oughton, E., Bunclark, L. & Lasage, R., 2018, Rainwater-Smart Agriculture in Arid and Semi-Arid Areas: Fostering the Use of Rainwater for Food Security, Poverty Alleviation, Landscape Restoration and Climate Resilience. Leal Filho, W. & de Trincheria Gomez, J. (eds.). Springer International Publishing Switzerland, p. 95-119 25 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access
water harvesting
Food Supply
Africa South of the Sahara
Sub-Saharan Africa
livelihood

A group selection perspective on economic behavior, institutions and organizations

van den Bergh, J. & Gowdy, J., 2018, Biological Economics. Lo, A. W., Harris, C. E., Harris, S. T. & Zhang, R. (eds.). Cheltenham: Edward Elgar, Vol. 2. (The International Library of Critical Writings in Economics series).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

A laser microdissection–liquid chromatography–tandem mass spectrometry workflow for post-mortem analysis of brain tissue

Hondius, D. C., Hoozemans, J. J. M., Rozemuller, A. J. M., Li, K. W. & Smit, A. B., 2018, Laser Capture Microdissection: Methods and Protocols. New York: Humana Press Inc, p. 371-383 13 p. (Methods in Molecular Biology; vol. 1723).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Workflow
Mass Spectrometry
Lasers
Brain
Brain Diseases

Analysis of metabolites from the tricarboxylic acid cycle for yeast and bacteria samples using gas chromatography mass spectrometry

Seifar, R. M., ten Pierick, A. & van Dam, P. T. N., 2018, Clinical Metabolomics: methods and protocols. Giera, M. (ed.). Humana Press Inc, p. 277-282 6 p. (Methods in Molecular Biology; vol. 1730).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Citric Acid Cycle
Gas Chromatography-Mass Spectrometry
Yeasts
Bacteria
Fumarates

A note on inner-outer factorization of wide matrix-valued functions

Frazho, A. E. & Ran, A. C. M., 2018, Operator Theory, Advances and Applications: In Honor of Rien Kaashoek. Springer International Publishing Switzerland, p. 201-214 14 p. (Operator Theory: Advances and Applications; vol. 271).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Factorization
G-function
Rational function
Expand
State Space

Architectural Technical Debt Identification: Moving Forward

Verdecchia, R., 13 Aug 2018, Proceedings of the 2018 IEEE 15th International Conference on Software Architecture Companion, ICSA-C 2018. Institute of Electrical and Electronics Engineers Inc., p. 43-44 2 p. 8432173. (Proceedings - 2018 IEEE 15th International Conference on Software Architecture Companion, ICSA-C 2018).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Architectural design
Deterioration
Costs

A short presentation of CLUmondo

van Vliet, J. & Verburg, P. H., 2018, Geomatic Approaches for Modeling Land Change Scenarios. Olmedo, M. T. C., Paegelow, M., Mas, J-F. & Escobar, F. (eds.). Springer, p. 485-492 8 p. (Lecture Notes in Geoinformation and Cartography).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Assessment and Adaptation to Climate Change-Related Floods Risks

Jongman, B., Winsemius, H. C., Fraser, S., Muis, S. & Ward, P. J., 2018, Oxford Encyclopedia of Natural Hazard Science. Oxford, UK: Oxford University Press, p. 1-29 29 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

climate change
flooding
damage
floodplain
population growth

A Structural Framework for GPCR Chemogenomics: What’s In a Residue Number?

Vass, M., Kooistra, A. J., Verhoeven, S., Gloriam, D., de Esch, I. J. P. & de Graaf, C., 2018, Computational Methods for GPCR Drug Discovery. Heifetz, A. (ed.). Humana Press Inc, p. 73-113 41 p. (Methods in Molecular Biology; vol. 1705).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

G-Protein-Coupled Receptors
Binding Sites
Ligands
Workflow
Mutation

A toeplitz-like operator with rational symbol having poles on the unit circle i: Fredholm properties

Groenewald, G. J., ter Horst, S., Jaftha, J. & Ran, A. C. M., 2018, Operator Theory, Advances and Applications: In Honor of Rien Kaashoek. Springer International Publishing Switzerland, p. 239-268 30 p. (Operator Theory: Advances and Applications; vol. 271).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Fredholm Property
Otto Toeplitz
Unit circle
Pole
Unbounded Operators

Basics of sensory data

Hoogendoorn, M. & Funk, B., 1 Jan 2018, Machine Learning for the Quantified Self: On the Art of Learning from Sensory Data. Springer/Verlag, p. 15-24 10 p. (Cognitive Systems Monographs; vol. 35).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Learning systems
Sensors

BiographyNet: Extracting Relations Between People and Events

Fokkens, A., Braake, S. T., Ockeloen, N., Vossen, P., Legêne, S., Schreiber, G. & Boer, V. D., 2018, Europa baut auf Biographien: Aspekte, Bausteine, Normen und Standards für eine europäische Biographik. Bernád, Á. Z., Gruber, C. & Kaiser, M. (eds.). Berlin: new academic press, p. 193-227 35 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access
File
Uncertainty
Target Groups
The Netherlands
Historical Sources
History

Biomass conversion at population level

Kooijman, S. A. L. M., 2018, Individual-Based Models and Approaches in Ecology: Populations, Communities and Ecosystems. CRC Press, p. 338-358 21 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Biomass
Predator
Prey
Harvesting
Energy

Canonical form for H-symplectic matrices

Groenewald, G. J., Janse van Rensburg, D. B. & Ran, A. C. M., 2018, Operator Theory, Advances and Applications: In Honor of Rien Kaashoek. Springer International Publishing Switzerland, p. 269-290 22 p. (Operator Theory: Advances and Applications; vol. 271).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Symplectic Matrix
Canonical form
Jordan Form
Invertible matrix
Invertible