Research output per year
Research output per year
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Dive into the research topics where Integrative Bioinformatics is active. These topic labels come from the works of this organisation's members. Together they form a unique fingerprint.
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Profiles
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dr. Sanne Abeln
- Faculty of Science, Bioinformatics - Associate Professor
- AIMMS - Associate Professor
- Integrative Bioinformatics - Associate Professor
Person: Academic
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dr. ir. Anton Feenstra
- Faculty of Science, Bioinformatics - Assistant Professor
- AIMMS - Assistant Professor
- Integrative Bioinformatics - Assistant Professor
Person: Academic
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Juami van Gils, MSc
- Faculty of Science, Bioinformatics - PhD Candidate
- AIMMS - PhD Candidate
- Integrative Bioinformatics - PhD Candidate
Person: Academic
Research output
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Methods Included: Standardizing Computational Reuse and Portability with the Common Workflow Language
Crusoe, M. R., Abeln, S., Iosup, A., Amstutz, P., Chilton, J., Tijanić, N., Ménager, H., Soiland-Reyes, S. & Goble, C., 20 May 2022, In: Communications of the ACM. 65, 6, p. 54-63 11 p.Research output: Contribution to Journal › Article › Academic › peer-review
Open AccessFile54 Downloads (Pure) -
PIPENN: protein interface prediction from sequence with an ensemble of neural nets
Stringer, B., de Ferrante, H., Abeln, S., Heringa, J., Feenstra, K. A. & Haydarlou, R., 15 Apr 2022, In: Bioinformatics (Oxford, England). 38, 8, p. 2111-2118 8 p.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
How sticky are our proteins? Quantifying hydrophobicity of the human proteome
Gils, J. H. M. V., Gogishvili, D., Eck, J. V., Bouwmeester, R., Dijk, E. V. & Abeln, S., 25 Jul 2021, In: arXiv. 2021, p. 1-20 20 p.Research output: Contribution to Journal › Article › Academic
Open AccessFile -
Online biophysical predictions for SARS-CoV-2 proteins
Kagami, L., Roca-Martínez, J., Gavaldá-García, J., Ramasamy, P., Feenstra, K. A. & Vranken, W. F., 23 Apr 2021, In: BMC Molecular and Cell Biology. 22, 1, p. 1-7 7 p., 23.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
Predicting the relationships between gut microbiota and mental disorders with knowledge graphs
Liu, T., Pan, X., Wang, X., Feenstra, K. A., Heringa, J. & Huang, Z., Dec 2021, In: Health information science and systems. 9, 1, p. 1-9 9 p., 3.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access
Activities
- 8 Lecture / Presentation
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Mitochondrial medicine avant la lettre, how the nuclear genome plays catchup to the process of mitochondrial genome degradation
K.A. Feenstra (Speaker) & M.A. Huynen (Speaker)
23 Feb 2017Activity: Lecture / Presentation › Academic
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Seeing the Trees through the Forest: Sequence-based Homo- and Heteromeric Protein-protein Interaction sites prediction using Random Forest
K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker) & Wim F. Vranken (Speaker)
5 Apr 2017Activity: Lecture / Presentation › Academic
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Advances in single molecule sequencing and applications
K.A. Feenstra (Speaker) & W. Pirovano (Speaker)
24 Aug 2016Activity: Lecture / Presentation › Academic
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CLUB-MARTINI: Selecting Favorable Interactions amongst Available Candidates, a Coarse-Grained Simulation approach to Scoring Docking Decoys
K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker) & Marc F Lensink (Speaker)
19 Apr 2016Activity: Lecture / Presentation › Academic
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Partner-Specific Interface Prediction in Modeling 3D Biomolecular Complexes
K.A. Feenstra (Speaker) & L. Xue (Speaker)
4 Nov 2015Activity: Lecture / Presentation › Academic