Research output per year
Research output per year
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Dive into the research topics where Integrative Bioinformatics is active. These topic labels come from the works of this organisation's members. Together they form a unique fingerprint.
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Profiles
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dr. Sanne Abeln
- Faculty of Science, Bioinformatics - Associate Professor
- AIMMS - Associate Professor
- Integrative Bioinformatics - Associate Professor
Person: Academic
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dr. ir. Anton Feenstra
- Faculty of Science, Bioinformatics - Assistant Professor
- AIMMS - Assistant Professor
- Integrative Bioinformatics - Assistant Professor
Person: Academic
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Juami van Gils, MSc
- Faculty of Science, Bioinformatics - PhD Candidate
- AIMMS - PhD Candidate
- Integrative Bioinformatics - PhD Candidate
Person: Academic
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dr. Maryam Hashemi Shabestari
- Faculty of Science, Bioinformatics - Research Associate
- AIMMS - Research Associate
- Integrative Bioinformatics - Research Associate
- LaserLaB - Molecular Biophysics - Research Associate
Person: Academic
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dr. R. Haydarlou
- Faculty of Science, Bioinformatics - Visiting Fellow
- AIMMS - Visiting Fellow
- Integrative Bioinformatics - Visiting Fellow
Person: Academic
Research output
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Predicting the relationships between gut microbiota and mental disorders with knowledge graphs
Liu, T., Pan, X., Wang, X., Feenstra, K. A., Heringa, J. & Huang, Z., Dec 2021, In: Health information science and systems. 9, 1, p. 3Research output: Contribution to Journal › Article › Academic › peer-review
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A community proposal to integrate structural bioinformatics activities in ELIXIR (3D-Bioinfo Community)
Orengo, C., Velankar, S., Wodak, S., Zoete, V., Bonvin, A. M. J. J., Elofsson, A., Feenstra, K. A., Gerloff, D. L., Hamelryck, T., Hancock, J. M., Helmer-Citterich, M., Hospital, A., Orozco, M., Perrakis, A., Rarey, M., Soares, C., Sussman, J. L., Thornton, J. M., Tuffery, P., Tusnady, G. & 3 others, , 22 Apr 2020, In: F1000Research. 9, 278.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
A framework for exhaustive modelling of genetic interaction patterns using Petri nets
Jacobsen, A., Ivanova, O., Amini, S., Heringa, J., Kemmeren, P. & Feenstra, K. A., 1 Apr 2020, In: Bioinformatics. 36, 7, p. 2142-2149 8 p.Research output: Contribution to Journal › Article › Academic › peer-review
Open AccessFile51 Downloads (Pure) -
The hydrophobic effect characterises the thermodynamic signature of amyloid fibril growth
van Gils, J. H. M., van Dijk, E., Peduzzo, A., Hofmann, A., Vettore, N., Schützmann, M. P., Groth, G., Mouhib, H., Otzen, D. E., Buell, A. K. & Abeln, S., 4 May 2020, In: PLoS Computational Biology. 16, 5, 25 p., e1007767.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
Abstract 1738: Characterization of structural variants within MACROD2 in the pathogenesis of colorectal cancer
Fijneman, R. J. A., Mekkes, N., Broek, E. V. D., Stringer, B., Glas, R. A., Komor, M. A., Rausch, C., Lieshout, S. V., Cuppen, E., Smith, M. L., Sebra, R. P., Rowell, W. J., Ashby, M., Carvalho, B., Heringa, J., Meijer, G. A. & Abeln, S., 1 Jul 2019. 1 p.Research output: Contribution to Conference › Paper › Academic
Activities
- 8 Lecture / Presentation
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Seeing the Trees through the Forest: Sequence-based Homo- and Heteromeric Protein-protein Interaction sites prediction using Random Forest
K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker) & Wim F. Vranken (Speaker)
5 Apr 2017Activity: Lecture / Presentation › Academic
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Mitochondrial medicine avant la lettre, how the nuclear genome plays catchup to the process of mitochondrial genome degradation
K.A. Feenstra (Speaker) & M.A. Huynen (Speaker)
23 Feb 2017Activity: Lecture / Presentation › Academic
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CLUB-MARTINI: Selecting Favorable Interactions amongst Available Candidates, a Coarse-Grained Simulation approach to Scoring Docking Decoys
K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker) & Marc F Lensink (Speaker)
19 Apr 2016Activity: Lecture / Presentation › Academic
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Advances in single molecule sequencing and applications
K.A. Feenstra (Speaker) & W. Pirovano (Speaker)
24 Aug 2016Activity: Lecture / Presentation › Academic
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CLUB-MARTINI: Selecting favorable interactions amongst available candidates: A coarse-grained simulation approach to scoring docking decoys.
K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker) & Marc F Lensink (Speaker)
8 Dec 2015Activity: Lecture / Presentation › Academic