Fingerprint Dive into the research topics where Integrative Bioinformatics is active. These topic labels come from the works of this organisation's members. Together they form a unique fingerprint.

Proteins Engineering & Materials Science
Sequence Alignment Medicine & Life Sciences
Alignment Mathematics
Genes Engineering & Materials Science
Protein Mathematics
Gene Expression Medicine & Life Sciences
Genome Medicine & Life Sciences
Systems Biology Medicine & Life Sciences

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Photo of Sanne Abeln

Sanne Abeln

Person: Academic

Photo of Anton Feenstra

Anton Feenstra

Person: Academic

No photo of Maryam Hashemi Shabestari

Maryam Hashemi Shabestari

Person: Academic

Photo of R. Haydarlou

R. Haydarlou

Person: Academic

No photo of Huub Hoefsloot

Huub Hoefsloot

Person: Academic

Research Output 2002 2019

Impact of pathogenic mutations of the GLUT1 glucose transporter on channel dynamics using ConsDYN enhanced sampling

Mouhib, H., Higuchi, A., Abeln, S., Yura, K. & Feenstra, K. A., 22 Mar 2019, In : F1000Research. 8, p. 322

Research output: Contribution to JournalArticleAcademic

Open Access
Facilitative Glucose Transport Proteins
Glucose Transporter Type 1
Molecular dynamics

Reasoning about cell dynamics using network models

Jacobsen, A., 2019, 182 p.

Research output: PhD ThesisPhD Thesis - Research VU, graduation VUAcademic

Open Access

SeRenDIP: SEquential REmasteriNg to DerIve Profiles for fast and accurate predictions of PPI interface positions

Hou, Q., De Geest, P., Griffioen, C. J., Abeln, S., Heringa, J. & Feenstra, K. A., 22 May 2019, In : Bioinformatics.

Research output: Contribution to JournalArticleAcademicpeer-review

Web Server
computer vision
data analysis

Tailor-made multiple sequence alignments using the PRALINE 2 alignment toolkit

Dijkstra, M. J. J., van der Ploeg, A. J., Feenstra, K. A., Fokkink, W. J., Abeln, S. & Heringa, J., 1 Aug 2019, In : Bioinformatics. p. 1-3 3 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Multiple Sequence Alignment
Sequence Alignment
Work Flow

Activities 2015 2017

  • 8 Lecture / Presentation

Seeing the Trees through the Forest: Sequence-based Homo- and Heteromeric Protein-protein Interaction sites prediction using Random Forest

K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker), Wim F. Vranken (Speaker)
5 Apr 2017

Activity: Lecture / PresentationAcademic

CLUB-MARTINI: Selecting Favorable Interactions amongst Available Candidates, a Coarse-Grained Simulation approach to Scoring Docking Decoys

K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker), Marc F Lensink (Speaker)
19 Apr 2016

Activity: Lecture / PresentationAcademic

Advances in single molecule sequencing and applications

K.A. Feenstra (Speaker), W. Pirovano (Speaker)
24 Aug 2016

Activity: Lecture / PresentationAcademic

CLUB-MARTINI: Selecting favorable interactions amongst available candidates: A coarse-grained simulation approach to scoring docking decoys.

K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker), Marc F Lensink (Speaker)
8 Dec 2015

Activity: Lecture / PresentationAcademic


NWO Veni

Sanne Abeln (Recipient), 2011