LaserLaB - Molecular Biophysics - Vrije Universiteit Amsterdam

Pim America
- p.p.b.americavunl
- Faculty of Science, Physics of Living Systems - PhD Candidate
- LaserLaB - Molecular Biophysics - PhD Candidate
Person: Academic
dr. Dirk Bald
- d.baldvunl
- Faculty of Science, Molecular Microbiology - Assistant Professor
- AIMMS - Assistant Professor
- LaserLaB - Molecular Biophysics - Assistant Professor
Person: Academic
Capucine Béraud
- c.m.s.beraudvunl
- Faculty of Science, Physics of Living Systems - PhD Candidate
- LaserLaB - Energy - PhD Candidate
- LaserLaB - Molecular Biophysics - PhD Candidate
Person: Academic
Vadim Bogatyr, MSc
- v.bogatyrvunl
- Faculty of Science, Physics of Living Systems - External PhD Candidate
- LaserLaB - Molecular Biophysics - External PhD Candidate
Person: Academic
dr. ir. Yves Bollen
- yves.bollenvunl
- Faculty of Science, Systems Biology - Assistant Professor
- AIMMS - Assistant Professor
- LaserLaB - Molecular Biophysics - Assistant Professor
Person: Academic

Top-down and back up: Modeling chromosome organization
Harju, J. K., 26 Jun 2025, 214 p.
Research output: PhD Thesis › PhD-Thesis - Research and graduation internal

Open Access
File
60 Downloads (Pure)
Optimal Cellular Prediction
Tjalma, A. J., 19 Jun 2025, 182 p.
Research output: PhD Thesis › PhD-Thesis - Research and graduation internal

Open Access
File
52 Downloads (Pure)
Quantifying the Flow of Information
Reinhardt, M. J., 13 Jun 2025, 190 p.
Research output: PhD Thesis › PhD-Thesis - Research and graduation internal

Open Access
File
58 Downloads (Pure)
A post-assembly conformational change makes the SARS-CoV-2 polymerase elongation-competent
Klein, M., Das, A., Bera, S. C., Anderson, T. K., Kocincova, D., Lee, H. W., Wang, B., Papini, F. S., Marecki, J. C., Arnold, J. J., Cameron, C. E., Raney, K. D., Artsimovitch, I., Götte, M., Kirchdoerfer, R. N., Depken, M. & Dulin, D., 10 Jun 2025, In: Nucleic acids research. 53, 10, p. 1-17 17 p., gkaf450.
Research output: Contribution to Journal › Article › Academic › peer-review

Open Access
DYF-5 regulates intraflagellar transport by affecting train turnaround
Mul, W., Mitra, A., Prevo, B. & Peterman, E. J. G., 1 May 2025, In: Molecular Biology of the Cell. 36, 5, p. 1-10 10 p., ar53.
Research output: Contribution to Journal › Article › Academic › peer-review

Open Access

Advanced Biophysics
Dulin, D.
1/09/24 → 31/08/25
Course
Bachelorproject
Heller, I.
1/09/24 → 31/08/25
Course
Biochemistry
Bollen, Y.
1/09/24 → 31/08/25
Course
Biophotonics
Bollen, Y.
1/09/24 → 31/08/25
Course
Bouwstenen van het leven
Bollen, Y. & Teusink, B.
1/09/24 → 31/08/25
Course

5 Peer review
1 Membership
1 Lecture / Presentation

Applied Optics (Journal)
Vienola, K. (Reviewer)
4 Mar 2017 → …
Activity: Peer review and Editorial work › Peer review › Academic
Biomedical Optics Express (Journal)
Vienola, K. (Reviewer)
15 Jul 2016 → …
Activity: Peer review and Editorial work › Peer review › Academic
Optics Letters (Journal)
Vienola, K. (Reviewer)
14 Jun 2016 → …
Activity: Peer review and Editorial work › Peer review › Academic
PLoS ONE (Journal)
Vienola, K. (Reviewer)
5 Oct 2016 → …
Activity: Peer review and Editorial work › Peer review › Academic
Parallel line scanning ophthalmoscope for retinal imaging
Vienola, K. (Speaker)
11 Jun 2016
Activity: Lecture / Presentation › Academic

ARVO International Travel Grant
Vienola, K. (Recipient), 5 Feb 2016
Prize / Grant: Prize › Academic
Biophotonics summer school SPIE Poster Award 2013
Vienola, K. (Recipient), 15 Jun 2013
Prize / Grant: Prize › Academic

File
CCCTC-binding Factor (CTCF): Choreographer of Genome Organization
Caldwell, C. (Recipient), 28 Mar 2024
Prize / Grant: Grant › Academic
Professional Opportunities for Women Committees travel award
Hashemi Shabestari, M. (Recipient), 2016
Prize / Grant: Prize › Academic

Raw experimental data for "PICH acts as a force-dependent nucleosome remodeler"
Spakman, D. (Creator), Clement, T. V. M. (Creator), Biebricher, A. S. (Creator), King, G. A. (Creator), Singh, M. I. (Creator), Hickson, I. D. (Creator), Peterman, E. J. G. (Creator) & Wuite, G. J. L. (Creator), DataverseNL, 2022
DOI: 10.34894/rdqlb5, https://dataverse.nl/citation?persistentId=doi:10.34894/RDQLB5
Dataset / Software: Dataset
Replication Data for: A local interplay between diffusion and intraflagellar transport distributes TRPV-channel OCR-2 along C. elegans chemosensory cilia
Van Krugten, J. (Creator), Danne, N. (Creator) & Peterman, E. J. G. (Creator), DataverseNL, 2022
DOI: 10.34894/p2gvhu, https://dataverse.nl/citation?persistentId=doi:10.34894/P2GVHU
Dataset / Software: Dataset
Viscoelasticity of diverse biological samples quantified by Acoustic Force Microrheology (AFMR)
Peterman, E. J. G. (Creator), Bergamaschi, G. (Creator), Taris, K. K. H. (Creator), Wuite, G. J. L. (Creator), Seymonson, X. M. R. (Creator), Biebricher, A. S. (Creator) & Witt, H. (Creator), DataverseNL, 2024
DOI: 10.34894/seja5t, https://dataverse.nl/citation?persistentId=doi:10.34894/SEJA5T
Dataset / Software: Dataset
Exploring metal availability in the natural niche of Streptococcus pneumoniae to discover potential vaccine antigens
Surmann, K. (Contributor), Joosten, I. (Contributor), van den Berg van Saparoea, H. B. (Contributor), Schmidt, F. (Contributor), Mitsi, E. (Contributor), Jong, W. S. P. (Contributor), Diavatopoulos, D. A. (Contributor), Ferreira, D. M. (Contributor), Hentschker, C. (Contributor), Ederveen, T. H. A. (Contributor), de Jonge, M. I. (Contributor), Völker, U. (Contributor), van Opzeeland, F. (Contributor), Luirink, J. (Contributor), Houben, D. (Contributor), van Beek, L. F. (Contributor) & van der Gaast–de Jongh, C. E. (Contributor), figshare Academic Research System, 1 Jan 2021
DOI: 10.6084/m9.figshare.13053349.v3, https://tandf.figshare.com/articles/dataset/Exploring_metal_availability_in_the_natural_niche_of_i_Streptococcus_pneumoniae_i_to_discover_potential_vaccine_antigens/13053349/3
Dataset / Software: Dataset
Exploring metal availability in the natural niche of Streptococcus pneumoniae to discover potential vaccine antigens
Van Beek, L. F. (Contributor), Surmann, K. (Contributor), Saparoea, H. B. V. D. B. V. (Contributor), Houben, D. (Contributor), Jong, W. S. P. (Contributor), Hentschker, C. (Contributor), Ederveen, T. H. A. (Contributor), Mitsi, E. (Contributor), Ferreira, D. M. (Contributor), Van Opzeeland, F. (Contributor), Jongh, C. E. V. D. G. –. D. (Contributor), Joosten, I. (Contributor), Völker, U. (Contributor), Schmidt, F. (Contributor), Luirink, J. (Contributor), Diavatopoulos, D. A. (Contributor) & De Jonge, M. I. (Contributor), Unknown Publisher, 1 Jan 2020
DOI: 10.6084/m9.figshare.13053349, https://tandf.figshare.com/articles/dataset/Exploring_metal_availability_in_the_natural_niche_of_i_Streptococcus_pneumoniae_i_to_discover_potential_vaccine_antigens/13053349
Dataset / Software: Dataset

Using sound to stretch cells
Bergamaschi, G. & Sorkin, R.
21/06/18
1 item of Media coverage
Press/Media: Research

LaserLaB - Molecular Biophysics

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Collaborations and top research areas from the last five years

Dive into details

Pim America

dr. Dirk Bald

Capucine Béraud

Vadim Bogatyr, MSc

dr. ir. Yves Bollen

Top-down and back up: Modeling chromosome organization

Optimal Cellular Prediction

Quantifying the Flow of Information

A post-assembly conformational change makes the SARS-CoV-2 polymerase elongation-competent

DYF-5 regulates intraflagellar transport by affecting train turnaround

Advanced Biophysics

Bachelorproject

Biochemistry

Biophotonics

Bouwstenen van het leven

Applied Optics (Journal)

Biomedical Optics Express (Journal)

Optics Letters (Journal)

PLoS ONE (Journal)

Parallel line scanning ophthalmoscope for retinal imaging

ARVO International Travel Grant

Biophotonics summer school SPIE Poster Award 2013

CCCTC-binding Factor (CTCF): Choreographer of Genome Organization

Professional Opportunities for Women Committees travel award

Raw experimental data for "PICH acts as a force-dependent nucleosome remodeler"

Replication Data for: A local interplay between diffusion and intraflagellar transport distributes TRPV-channel OCR-2 along C. elegans chemosensory cilia

Viscoelasticity of diverse biological samples quantified by Acoustic Force Microrheology (AFMR)

Exploring metal availability in the natural niche of Streptococcus pneumoniae to discover potential vaccine antigens

Exploring metal availability in the natural niche of Streptococcus pneumoniae to discover potential vaccine antigens

Using sound to stretch cells

LaserLaB - Molecular Biophysics

Fingerprint

Collaborations and top research areas from the last five years

Profiles

Research output

Courses

Activities

Prizes

Datasets

Press/Media