Research Output per year
Research Output 1999 2019
- 1 - 50 out of 360 results
- Publication Year, Title (descending)
Adaptive, locally linear models of complex dynamics
Costa, A. C., Ahamed, T. & Stephens, G. J., 29 Jan 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 5, p. 1501-1510 10 p.Research output: Contribution to Journal › Article › Academic › peer-review
Capturing the Continuous Complexity of Behavior in C. elegans
Ahamed, T., Costa, A. C. & Stephens, G. J., 2019, In : bioRxiv. p. 827535Research output: Contribution to Journal › Article › Academic
Deconstruction of septin assembly
Szuba, A., 2019, 160 p.Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU › Academic
Distinct requirements for tail-anchored membrane protein biogenesis in escherichia coli
Peschke, M., Le Goff, M., Koningstein, G. M., Vischer, N. O., Abdel-Rehim, A., High, S., Van Ulsen, P. & Luirink, J., 1 Jan 2019, In : mBio. 10, 5, e01580-19.Research output: Contribution to Journal › Article › Academic › peer-review
Inhibition of autotransporter biogenesis by small molecules
Steenhuis, M., Abdallah, A. M., de Munnik, S. M., Kuhne, S., Sterk, G. J., van den Berg van Saparoea, B., Westerhausen, S., Wagner, S., van der Wel, N. N., Wijtmans, M., van Ulsen, P., Jong, W. S. P. & Luirink, J., Jul 2019, In : Molecular Microbiology. 112, 1, p. 81-98 18 p.Research output: Contribution to Journal › Article › Academic › peer-review
Interrogating the essential bacterial cell division protein FtsQ with fragments using target immobilized NMR screening (TINS)
Glas, M., Eiso, A. B., Hollander, J., Siegal, G., Luirink, J. & de Esch, I., 1 Aug 2019, In : International Journal of Molecular Sciences. 20, 15, 3684.Research output: Contribution to Journal › Article › Academic › peer-review
Isoniazid bactericidal activity involves electron transport chain perturbation
Zeng, S., Soetaert, K., Ravon, F., Vandeput, M., Bald, D., Kauffmann, J. M., Mathys, V., Wattiez, R. & Fontaine, V., 1 Mar 2019, In : Antimicrobial Agents and Chemotherapy. e01841-18.Research output: Contribution to Journal › Article › Academic › peer-review
Maturation of adenovirus primes the protein nano-shell for successful endosomal escape
Denning, D., Bennett, S., Mullen, T., Moyer, C., Vorselen, D., Wuite, G. J. L., Nemerow, G. & Roos, W. H., 7 Mar 2019, In : Nanoscale. 11, 9, p. 3799-3803 5 p.Research output: Contribution to Journal › Article › Academic › peer-review
Modelling the ballistic-to-diffusive transition in nematode motility reveals variation in exploratory behaviour across species
Helms, S. J., Rozemuller, W. M., Costa, A. C., Avery, L., Stephens, G. J. & Shimizu, T. S., 30 Aug 2019, In : Journal of the Royal Society, Interface. 16, 157Research output: Contribution to Journal › Article › Academic › peer-review
Origin of Slow Stress Relaxation in the Cytoskeleton
Mulla, Y., Mackintosh, F. C. & Koenderink, G. H., 29 May 2019, In : Physical Review Letters. 122, 21, 218102.Research output: Contribution to Journal › Article › Academic › peer-review
Real-Time Assembly of Viruslike Nucleocapsids Elucidated at the Single-Particle Level
Marchetti, M., Kamsma, D., Cazares Vargas, E., Hernandez García, A., Van Der Schoot, P., De Vries, R., Wuite, G. J. L. & Roos, W. H., 14 Aug 2019, In : Nano Letters. 19, 8, p. 5746-5753 8 p.Research output: Contribution to Journal › Article › Academic › peer-review
Single-molecule polarization microscopy of DNA intercalators sheds light on the structure of S-DNA
Backer, A. S., Biebricher, A. S., King, G. A., Wuite, G. J. L., Heller, I. & Peterman, E. J. G., 22 Mar 2019, In : Science advances. 5, 3, p. 1-11 11 p., eaav1083.Research output: Contribution to Journal › Article › Academic › peer-review
The Cell: Strong, Soft Matter
Mulla, Y., 2019, 152 p.Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU › Academic
A brief introduction to single-molecule fluorescence methods
van den Wildenberg, S. M. J. L., Prevo, B. & Peterman, E. J. G., 2018, Single Molecule Analysis: Methods and Protocols. Humana Press Inc, p. 93-113 21 p. (Methods in Molecular Biology; vol. 1665).Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic
Acetylation and phosphorylation of human TFAM regulate TFAM-DNA interactions via contrasting mechanisms
Shabestari, M. H., King, G. A., Taris, K-K. H., Pandey, A. K., Venkatesh, S., Thilagavathi, J., Singh, K., Koppisetti, R. K., Temiakov, D., Roos, W. H., Suzuki, C. K. & Wuite, G. J. L., 20 Apr 2018, In : Nucleic Acids Research. 46, 7, p. 3633-3642 10 p.Research output: Contribution to Journal › Article › Academic › peer-review
Acoustic Force Spectroscopy (AFS): From single molecules to single cells
Kamsma, D., 2018, 188 p.Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU › Academic
Adaptive optics via self-interference digital holography for non-scanning three-dimensional imaging in biological samples
Man, T., Wan, Y., Yan, W., Wang, X. H., Peterman, E. J. G. & Wang, D., 1 Jun 2018, In : Biomedical Optics Express. 9, 6, p. 2614-2626 13 p., #326210.Research output: Contribution to Journal › Article › Academic › peer-review
A polarized view on DNA under tension
Van Mameren, J., Vermeulen, K., Wuite, G. J. L. & Peterman, E. J. G., 28 Mar 2018, In : Journal of Chemical Physics. 148, 12, 123306.Research output: Contribution to Journal › Article › Academic › peer-review
A single point mutation in precursor protein VI doubles the mechanical strength of human adenovirus
van Rosmalen, M. G. M., Nemerow, G. R., Wuite, G. J. L. & Roos, W. H., Jun 2018, In : Journal of Biological Physics. 44, 2, p. 119-132 14 p.Research output: Contribution to Journal › Article › Academic › peer-review
Atomic force microscopy-based mechanobiology
Krieg, M., Fläschner, G., Alsteens, D., Gaub, B. M., Roos, W. H., Wuite, G. J. L., Gaub, H. E., Gerber, C., Dufrêne, Y. F. & Müller, D. J., 1 Nov 2018, In : Nature Reviews Physics. 1, January, p. 41-57 17 p.Research output: Contribution to Journal › Article › Academic › peer-review
Comparing autotransporter β-domain configurations for their capacity to secrete heterologous proteins to the cell surface
Jong, W. S. P., Schillemans, M., ten Hagen-Jongman, C. M., Luirink, J. & van Ulsen, P., 7 Feb 2018, In : PLoS ONE. 13, 2, e0191622.Research output: Contribution to Journal › Article › Academic › peer-review
Controlled Disturbance of Intraflagellar Transport in C. elegans Chemosensory Cilia Results in Changes of Ciliary Structure
Jona, M., Oswald, F., Girard, J., van Loo, J. & Peterman, E. J. G., 2 Feb 2018, In : Biophysical Journal. 114, 3, p. 655A-656AResearch output: Contribution to Journal › Meeting Abstract › Academic
Direct Observation and Quantification of Protein Dynamics on Negatively-Supercoiled DNA
King, G. A., Burla, F., Peterman, E. J. G. & Wuite, G. J. L., 2 Feb 2018, In : Biophysical Journal. 114, 3, p. 168A-168AResearch output: Contribution to Journal › Meeting Abstract › Academic
Display of recombinant proteins on bacterial outer membrane vesicles by using protein ligation
van den Berg van Saparoea, H. B., Houben, D., de Jonge, M. I., Jong, W. S. P. & Luirink, J., Apr 2018, In : Applied and Environmental Microbiology. 84, 8, p. 1-17 17 p., e02567-17.Research output: Contribution to Journal › Article › Academic › peer-review
Effect of dsDNA on the Assembly Pathway and Mechanical Strength of SV40 VP1 Virus-like Particles
van Rosmalen, M. G. M., Li, C., Zlotnick, A., Wuite, G. J. L. & Roos, W. H., 6 Nov 2018, In : Biophysical Journal. 115, 9, p. 1656-1665 10 p.Research output: Contribution to Journal › Article › Academic › peer-review
Ensemble and single-molecule dynamics of intraflagellar transport in C. elegans
Mijalkovic, J., 2018, 182 p.Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU › Academic
Exposing Chromosome Architecture and Mechanics Using Optical Manipulation and Fluorescence Microscopy
Meijering, A. E. C., Sarlos, K., Bizard, A. H., Acar, S., Venegas, A. B., Bhowmick, R., Liu, Y., Heller, I., Hickson, I., Peterman, E. J. G. & Wuite, G. J. L., 2 Feb 2018, In : Biophysical Journal. 114, 3, p. 446A-446AResearch output: Contribution to Journal › Meeting Abstract › Academic
Fibrin structure and mechanics: A journey across scales
Vos, B. E., 2018, 218 p.Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU › Academic
Hyperstretching DNA
Schakenraad, K., Biebricher, A. S., Sebregts, M., ten Bensel, B., Peterman, E. J. G., Wuite, G. J. L., Storm, C., van der Schoot, P. & Heller, I., 2 Feb 2018, In : Biophysical Journal. 114, 3, p. 90A-90AResearch output: Contribution to Journal › Meeting Abstract › Academic
Imaging the structure and the movement of the retina with scanning light ophthalmoscopy
Vienola, K. V., 2018, 117 p.Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU › Academic
Immunization with Skp delivered on outer membrane vesicles protects mice against enterotoxigenic Escherichia coli CHALLENGE
Hays, M. P., Houben, D., Yang, Y., Luirink, J. & Hardwidge, P. R., 1 May 2018, In : Frontiers in Cellular and Infection Microbiology. 8, MAY, 132.Research output: Contribution to Journal › Article › Academic › peer-review
Interplay between Ciliary Ultrastructure and IFT-Train Dynamics Revealed by Single-Molecule Super-resolution Imaging
Oswald, F., Prevo, B., Acar, S. & Peterman, E. J. G., 2 Oct 2018, In : Cell Reports. 25, 1, p. 224-235 12 p.Research output: Contribution to Journal › Article › Academic › peer-review
In vivo retinal imaging for fixational eye motion detection using a high-speed digital micromirror device (DMD)-based ophthalmoscope
Vienola, K. V., Damodaran, M., Braaf, B., Vermeer, K. A. & de Boer, J. F., 1 Feb 2018, In : Biomedical Optics Express. 9, 2, p. 591-602 12 p., #313640.Research output: Contribution to Journal › Article › Academic › peer-review
Ionophoric effects of the antitubercular drug bedaquiline
Hards, K., McMillan, D. G. G., Schurig-Briccio, L. A., Gennis, R. B., Lill, H., Bald, D. & Cook, G. M., 10 Jul 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 28, p. 7326-7331 6 p.Research output: Contribution to Journal › Article › Academic › peer-review
Kinesin motor stepping challenged: The impact of traffic jams and temperature
Kushwaha, V. S., 2018, 140 p.Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU › Academic
Multilamellar nanovesicles show distinct mechanical properties depending on their degree of lamellarity
Vorselen, D., Marchetti, M., López-Iglesias, C., Peters, P. J., Roos, W. H. & Wuite, G. J. L., 21 Mar 2018, In : Nanoscale. 10, 11, p. 5318-5324 7 p.Research output: Contribution to Journal › Article › Academic › peer-review
Nanomechanics of Extracellular Vesicles Reveals Vesiculation Pathways
Sorkin, R., Huisjes, R., Bošković, F., Vorselen, D., Pignatelli, S., Ofir-Birin, Y., Freitas Leal, J. K., Schiller, J., Mullick, D., Roos, W. H., Bosman, G., Regev-Rudzki, N., Schiffelers, R. M. & Wuite, G. J. L., 27 Sep 2018, In : Small. 14, 39, p. 1-8 8 p., 1801650.Research output: Contribution to Journal › Article › Academic › peer-review
Normal stresses in semiflexible polymer hydrogels
Vahabi, M., Vos, B. E., De Cagny, H. C. G., Bonn, D., Koenderink, G. H. & Mackintosh, F. C., 28 Mar 2018, In : Physical Review E. 97, 3, p. 1-11 11 p., 032418.Research output: Contribution to Journal › Article › Academic › peer-review
On display: Autotransporter secretion and application
Van Ulsen, P., Zinner, K. M., Jong, W. S. P. & Luirink, J., 1 Sep 2018, In : FEMS Microbiology Letters. 365, 18, p. 1-10 10 p., fny165.Research output: Contribution to Journal › Review article › Academic › peer-review
Probing cellular mechanics with acoustic force spectroscopy
Sorkin, R., Bergamaschi, G., Kamsma, D., Brand, G., Dekel, E., Ofir-Birin, Y., Rudik, A., Gironella, M., Ritort, F., Regev-Rudzki, N., Roos, W. H. & Wuite, G. J. L., 8 Aug 2018, In : Molecular Biology of the Cell. 29, 16, p. 2005-2011 7 p.Research output: Contribution to Journal › Article › Academic › peer-review
Quantifying Local Molecular Tension Using Intercalated DNA Fluorescence
King, G. A., Biebricher, A. S., Heller, I., Peterman, E. J. G. & Wuite, G. J. L., 11 Apr 2018, In : Nano Letters. 18, 4, p. 2274-2281 8 p.Research output: Contribution to Journal › Article › Academic › peer-review
Reconstitution of anaphase DNA bridge recognition and disjunction
Sarlós, K., Biebricher, A. S., Bizard, A. H., Bakx, J. A. M., Ferreté-Bonastre, A. G., Modesti, M., Paramasivam, M., Yao, Q., Peterman, E. J. G., Wuite, G. J. L. & Hickson, I. D., 3 Sep 2018, In : Nature Structural and Molecular Biology. 25, 9, p. 868-876 9 p.Research output: Contribution to Journal › Article › Academic › peer-review
Single-Cell Acoustic Force Spectroscopy: Resolving Kinetics and Strength of T Cell Adhesion to Fibronectin
Kamsma, D., Bochet, P., Oswald, F., Alblas, N., Goyard, S., Wuite, G. J. L., Peterman, E. J. G. & Rose, T., 11 Sep 2018, In : Cell Reports. 24, 11, p. 3008-3016 9 p.Research output: Contribution to Journal › Article › Academic › peer-review
Single Molecule Analysis: Methods and Protocols
Peterman, E. (ed.), 2018, 2 ed. New York: Humana Press, Methods Mol Biol. 380 p. (Methods in molecular biology; vol. 1665)Research output: Book / Report › Book editing › Academic
Single-molecule fluorescence microscopy in living Caenorhabditis elegans
van Krugten, J. & Peterman, E. J. G., 2018, Single Molecule Analysis: Methods and Protocols. Humana Press Inc, p. 145-154 10 p. (Methods in Molecular Biology; vol. 1665).Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic
Single-molecule imaging of Escherichia coli transmembrane proteins
Varadajan, A., Oswald, F. & Bollen, Y. J. M., 2018, Methods in Molecular Biology. Peterman, E. (ed.). Humana Press Inc, Vol. 1665. p. 135-144 10 p. (Methods in Molecular Biology; vol. 1665).Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review
Single-molecule measurements using acoustic force spectroscopy (AFS)
Kamsma, D. & Wuite, G. J. L., Jan 2018, Methods in Molecular Biology. New York, NY: Humana Press Inc, p. 341-351 11 p. (Methods in Molecular Biology; vol. 1665).Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review
Single-Molecule Turnarounds of Intraflagellar Transport at the C. elegans Ciliary Tip
Mijalkovic, J., van Krugten, J., Oswald, F., Acar, S. & Peterman, E. J. G., 13 Nov 2018, In : Cell Reports. 25, 7, p. 1701-1707.e2 10 p.Research output: Contribution to Journal › Article › Academic › peer-review
Structural analysis of the interaction between the bacterial cell division proteins FTSQ and FTSB
Kureisaite-Ciziene, D., Varadajan, A., McLaughlin, S. H., Glas, M., Silva, A. M., Luirink, R., Mueller, C., Blaauwen, T. D., Grossmann, T. N., Luirink, J. & Löwe, J., 11 Sep 2018, In : mBio. 9, 5, p. 1-17 17 p., e01346-18.Research output: Contribution to Journal › Article › Academic › peer-review
The anti-mycobacterial activity of the cytochrome bcc inhibitor Q203 can be enhanced by small-molecule inhibition of cytochrome bd.
Lu, P., Asseri, A. H. O., Kremer, M., Maaskant, J., Ummels, R., Lill, H. & Bald, D., 8 Feb 2018, In : Scientific Reports. 8Research output: Contribution to Journal › Article › Academic › peer-review