Molecular Cell Physiology

Research output

Research output per year 1978 1998 1999 2000 2002 2004 2005 2007 2008 2009 2010 2011 2012 2013 2014 2018 2021

• 765 Article
• 114 Chapter
• 42 PhD-Thesis - Research and graduation internal
• 18 Conference contribution
• 60 More
  • 15 Review article
  • 10 PhD-Thesis – Research external, graduation internal
  • 6 Abstract
  • 5 Book
  • 5 Report
  • 5 Meeting Abstract
  • 4 Patent
  • 2 Inaugural speech
  • 2 Comment / Letter to the editor
  • 2 Erratum
  • 2 PhD-Thesis – Research internal, graduation external
  • 1 Book editing
  • 1 PhD-Thesis – Research and graduation external

Research output per year

Research output per year

Search results

• 2021

  Age-related susceptibility to insulin resistance arises from a combination of CPT1B decline and lipid overload

  Vieira-Lara, M. A., Dommerholt, M. B., Zhang, W., Blankestijn, M., Wolters, J. C., Abegaz, F., Gerding, A., van der Veen, Y. T., Thomas, R., van Os, R. P., Reijngoud, D. J., Jonker, J. W., Kruit, J. K. & Bakker, B. M., Dec 2021, In: BMC Biology. 19, 1, 154.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Carnitine O-Palmitoyltransferase 100%
  • carnitine palmitoyltransferase 97%
  • Nutrition 90%
  • insulin resistance 87%
  • high fat diet 76%

• Author Correction: High biodiversity in a benzene-degrading nitrate-reducing culture is sustained by a few primary consumers

  Melkonian, C., Fillinger, L., Atashgahi, S., da Rocha, U. N., Kuiper, E., Olivier, B., Braster, M., Gottstein, W., Helmus, R., Parsons, J. R., Smidt, H., van der Waals, M., Gerritse, J., Brandt, B. W., Röling, W. F. M., Molenaar, D. & van Spanning, R. J. M., 18 Jun 2021, In: Communications biology. 4, p. 774-774 1 p.

  Research output: Contribution to Journal › Erratum › Academic

  Open Access

• Bistability in fatty-acid oxidation resulting from substrate inhibition

  Abegaz, F., Martines, A. C. M. F., Vieira Lara, M. A., Morales, M. R., Reijngoud, D. J., Wit, E. C. & Bakker, B. M., Aug 2021, In: PLoS Computational Biology. 17, 8, e1009259.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Oxidation 100%
  • Fatty Acids 97%
  • Bistability 94%
  • Fatty acids 86%
  • Substrate 80%

• Computational modelling of the Δ4 and Δ5 adrenal steroidogenic pathways provides insight into hypocortisolism

  Louw, C., van Schalkwyk, E. J., Conradie, R., Louw, R., Engelbrecht, Y., Storbeck, K. H., Swart, A. C., van Niekerk, D. D., Snoep, J. L. & Swart, P., 15 Apr 2021, In: Molecular and cellular endocrinology. 526, p. 1-8 8 p., 111194.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Steroid 17-alpha-Hydroxylase 100%
  • Goats 85%
  • Cold-Shock Response 68%
  • Animals 66%
  • Enzymes 56%

• Different resource allocation in a bacillus subtilis population displaying bimodal motility

  Syvertsson, S., Wang, B., Staal, J., Gao, Y., Kort, R. & Hamoen, L. W., Jun 2021, In: Journal of Bacteriology. 203, 12, p. 1-11 11 p., e00037-21.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Resource Allocation 100%
  • Bacillus subtilis 91%
  • Population 32%
  • Growth 26%
  • Single-Cell Analysis 14%

• Different resource allocation in a Bacillus subtilis population displaying bimodal motility

  Hamoen, L. W., Wang, B., Staal, J., Gao, Y., Kort, R. & Syvertsson, S., 22 Jan 2021, In: bioRxiv. 2021, p. 1-35 35 p.

  Research output: Contribution to Journal › Article › Academic

  Open Access

  • resource allocation 100%
  • Bacillus subtilis 76%
  • cells 26%
  • chemotaxis 9%
  • transactivators 9%

• Effects of DNA preservation solution and DNA extraction methods on microbial community profiling of soil

  Iturbe-Espinoza, P., Brandt, B. W., Braster, M., Bonte, M., Brown, D. M. & van Spanning, R. J. M., Aug 2021, In: Folia Microbiologica. 66, 4, p. 597-606 10 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Soil 100%
  • Microbiota 94%
  • DNA 51%
  • Gram-Positive Bacteria 33%
  • rRNA Genes 32%

• High biodiversity in a benzene-degrading nitrate-reducing culture is sustained by a few primary consumers

  Melkonian, C., Fillinger, L., Atashgahi, S., da Rocha, U. N., Kuiper, E., Olivier, B., Braster, M., Gottstein, W., Helmus, R., Parsons, J. R., Smidt, H., van der Waals, M., Gerritse, J., Brandt, B. W., Röling, W. F. M., Molenaar, D. & van Spanning, R. J. M., Dec 2021, In: Communications biology. 4, 1, 530.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Biodiversity 100%
  • Benzene 86%
  • Nitrates 75%
  • benzene 74%
  • nitrates 57%

• Intercellular communication induces glycolytic synchronization waves between individually oscillating cells

  Mojica-Benavides, M., van Niekerk, D. D., Mijalkov, M., Snoep, J. L., Mehlig, B., Volpe, G., Goksör, M. & Adiels, C. B., 9 Feb 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 6, p. 1-8 8 p., e2010075118.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • synchronism 100%
  • communication 95%
  • cells 62%
  • organs 59%
  • chambers 30%

• Interstrain variability of human vaginal lactobacillus crispatus for metabolism of biogenic amines and antimicrobial activity against urogenital pathogens

  Puebla-Barragan, S., Watson, E., van der Veer, C., Chmiel, J. A., Carr, C., Burton, J. P., Sumarah, M., Kort, R. & Reid, G., 1 Aug 2021, In: Molecules. 26, 15, 4538.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Lactobacillus crispatus 100%
  • pathogens 81%
  • Pathogens 78%
  • Biogenic Amines 75%
  • Metabolism 73%

• Model Selection Reveals the Butyrate-Producing Gut Bacterium Coprococcus eutactus as Predictor for Language Development in 3-Year-Old Rural Ugandan Children

  Kort, R., Schlösser, J., Vazquez, A. R., Atukunda, P., Muhoozi, G. K. M., Wacoo, A. P., Sybesma, W. F. H., Westerberg, A. C., Iversen, P. O. & Schoen, E. D., 2 Jun 2021, In: Frontiers in Microbiology. 12, June, p. 1-14 14 p., 681485.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Language Development 100%
  • Butyrates 99%
  • Gastrointestinal Microbiome 63%
  • Bacteria 53%
  • Language 50%

• Model selection reveals the butyrate-producing gut bacterium Coprococcus eutactus as predictor for language development in three-year-old rural Ugandan children

  Kort, R., Schlösser, J., Vazquez, A. R., Atukunda, P., Muhoozi, G. K. M., Wacoo, A. P., Sybesma, W. F. H., Westerberg, A. C., Iversen, P. O. & Schoen, E. D., 25 Mar 2021, In: medRxiv. 2021, p. 1-28 28 p.

  Research output: Contribution to Journal › Article › Academic

  Open Access

  • Language Development 100%
  • Butyrates 99%
  • Gastrointestinal Microbiome 66%
  • Bacteria 53%
  • Language 41%

• New approach methods supporting read-across: Two neurotoxicity AOP-based IATA case studies

  Van der Stel, W., Carta, G., Eakins, J., Delp, J., Suciu, I., Forsby, A., Cediel-Ulloa, A., Attoff, K., Troger, F., Kamp, H., Gardner, I., Zdrazil, B., Moné, M. J., Ecker, G. F., Pastor, M., Gómez-Tamayo, J. C., White, A., Danen, E. H. J., Leist, M., Walker, P. & 3 others, Jennings, P., Hougaard Bennekou, S. & Van de Water, B., 10 Jun 2021, In: Altex.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Electron Transport 100%
  • Strobilurins 95%
  • Learning 67%
  • Inhibition (Psychology) 67%
  • Toxicokinetics 62%

• Quantifying the Insulin Response in Mouse C2C12 Skeletal Muscle: A Minimal Modelling Approach

  Kühn, S., 7 Jul 2021, s.l.: s.n.. 233 p.

  Research output: PhD Thesis › PhD-Thesis - Research and graduation internal

  Open Access

  File

  • skeletal muscle 100%
  • insulin 95%
  • glucose transporters 82%
  • mice 62%
  • glucose 28%
  95 Downloads (Pure)

• Salivary biomarkers of stress and inflammation in first graders in Côte d′Ivoire: Effects of a probiotic food intervention

  Brett, B. E., Koko, B. K., Doumbia, H. O. Y., Koffi, F. K., Assa, S. E., Zahé, K. Y. A. S., Faye-Ketté, H., Kati-Coulibaly, S., Kort, R., Sybesma, W., Reid, G. & de Weerth, C., Jul 2021, In: Psychoneuroendocrinology. 129, p. 1-8 8 p., 105255.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Probiotics 100%
  • Food 65%
  • Biomarkers 61%
  • Inflammation 54%
  • Hydrocortisone 40%

• Transcriptional and metabolic response of wine-related lactiplantibacillus plantarum to different conditions of aeration and nitrogen availability

  Binati, R. L., Toit, M. D., Snoep, J. L., Salvetti, E. & Torriani, S., 2021, In: Fermentation. 7, 2, 68.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Wine 100%
  • Lactobacillales 93%
  • Bacteria 81%
  • aeration 75%
  • Nitrogen 71%

• Uncovering the effects of heterogeneity and parameter sensitivity on within-host dynamics of disease: malaria as a case study

  Horn, S., Snoep, J. L. & van Niekerk, D. D., 24 Jul 2021, In: BMC Bioinformatics. 22, p. 1-21 21 p., 384.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Parameter Sensitivity 100%
  • Malaria 93%
  • Uncertainty 63%
  • Prediction Model 29%
  • Model 22%
• 2020

  A combined experimental and modelling approach for the Weimberg pathway optimisation

  Shen, L., Kohlhaas, M., Enoki, J., Meier, R., Schönenberger, B., Wohlgemuth, R., Kourist, R., Niemeyer, F., van Niekerk, D., Bräsen, C., Niemeyer, J., Snoep, J. & Siebers, B., 27 Feb 2020, In: Nature Communications. 11, 1, p. 1-13 13 p., 1098.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Bioconversion 100%
  • Caulobacter crescentus 99%
  • Metabolic engineering 99%
  • Hydro-Lyases 96%
  • Pentoses 94%

• A Comparative Interrupted Times Series on the Health Impact of Probiotic Yogurt Consumption Among School Children From Three to Six Years Old in Southwest Uganda

  Westerik, N., Nelson, A., Wacoo, A. P., Sybesma, W. & Kort, R., 9 Dec 2020, In: Frontiers in nutrition. 7, p. 1-15 15 p., 574792.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Interrupted Time Series Analysis 100%
  • Yogurt 97%
  • school children 91%
  • Uganda 84%
  • time series analysis 80%

• Advice from a systems-biology model of the corona epidemics

  Westerhoff, H. V. & Kolodkin, A. N., 1 Dec 2020, In: NPJ systems biology and applications. 6, 1, p. 1-5 5 p., 18.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Systems Biology 100%
  • Corona 94%
  • Viruses 90%
  • Epidemics 66%
  • Adaptive Strategies 62%

• Aflatoxins: Occurrence, exposure, and binding to lactobacillus species from the gut microbiota of rural ugandan children

  Wacoo, A. P., Atukunda, P., Muhoozi, G., Braster, M., Wagner, M., van den Broek, T. J., Sybesma, W., Westerberg, A. C., Iversen, P. O. & Kort, R., Mar 2020, In: Microorganisms. 8, 3, p. 1-15 15 p., 347.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Aflatoxins 100%
  • Lactobacillus 84%
  • Gastrointestinal Microbiome 74%
  • Aflatoxin B1 49%
  • Growth Disorders 45%

• Biosignature Analysis of Mars Soil Analogs from the Atacama Desert: Challenges and Implications for Future Missions to Mars

  Aerts, J. W., Riedo, A., Melton, D. J., Martini, S., Flahaut, J., Meierhenrich, U. J., Meinert, C., Myrgorodska, I., Lindner, R. & Ehrenfreund, P., Jun 2020, In: Astrobiology. 20, 6, p. 766-784 19 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Mars 100%
  • deserts 94%
  • soil analysis 81%
  • mars 78%
  • Soil 72%

• Clb3-centered regulations are recurrent across distinct parameter regions in minimal autonomous cell cycle oscillator designs

  Mondeel, T. D. G. A., Ivanov, O., Westerhoff, H. V., Liebermeister, W. & Barberis, M., 3 Apr 2020, In: NPJ systems biology and applications. 6, 1, p. 1-15 15 p., 8.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Cell Cycle 100%
  • Cyclins 91%
  • Formal Social Control 76%
  • Cells 73%
  • Oscillation 59%

• Complex Stability and an Irrevertible Transition Reverted by Peptide and Fibroblasts in a Dynamic Model of Innate Immunity

  Abudukelimu, A., Barberis, M., Redegeld, F., Sahin, N., Sharma, R. P. & Westerhoff, H. V., 14 Feb 2020, In: Frontiers in Immunology. 10, p. 1-20 20 p., 3091.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Innate Immunity 100%
  • Fibroblasts 79%
  • Peptides 68%
  • Inflammation 64%
  • Antigens 56%

• Detection and reduction of aflatoxin in the food chain

  Wacoo, P. A., 2020, 181 p.

  Research output: PhD Thesis › PhD-Thesis - Research and graduation internal

  Open Access

  File
  256 Downloads (Pure)

• Development and evaluation of a harmonized whole body physiologically based pharmacokinetic (PBPK) model for flutamide in rats and its extrapolation to humans

  Sharma, R. P., Kumar, V., Schuhmacher, M., Kolodkin, A. & Westerhoff, H. V., Mar 2020, In: Environmental Research. 182, p. 1-14 14 p., 108948.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  File

  • Pharmacokinetics 100%
  • Flutamide 98%
  • Rats 83%
  • pharmacokinetics 80%
  • Extrapolation 76%
  61 Downloads (Pure)

• Empowering women through probiotic fermented food in East Africa

  Reid, G., Sybesma, W., Matovu, W., Onyango, A., Westerik, N. & Kort, R., Jun 2020, In: Journal of global health. 10, 1, p. 1-5 5 p., 010330.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

• Fermented foods in a global age: East meets West

  Tamang, J. P., Cotter, P. D., Endo, A., Han, N. S., Kort, R., Liu, S. Q., Mayo, B., Westerik, N. & Hutkins, R., 3 Jan 2020, In: Comprehensive Reviews in Food Science and Food Safety. 19, 1, p. 184-217 34 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Fermented Foods 100%
  • fermented foods 83%
  • Food and Beverages 26%
  • fermented beverages 19%
  • starter cultures 14%

• Locally produced probiotic yoghurt for better nutrition and increased incomes in Uganda

  Westerik, C. H., 2020, 222 p.

  Research output: PhD Thesis › PhD-Thesis - Research and graduation internal

  Open Access

  File
  349 Downloads (Pure)

• Long-term exposure of activated sludge in chemostats leads to changes in microbial communities composition and enhanced biodegradation of 4-chloroaniline and N-methylpiperazine

  Poursat, B. A. J., van Spanning, R. J. M., Braster, M., Helmus, R., de Voogt, P. & Parsons, J. R., 1 Mar 2020, In: Chemosphere. 242, 125102.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • 4-chloroaniline 100%
  • Chemostats 87%
  • Biodegradation 73%
  • chemostat 70%
  • Sewage 66%

• No associations between microbiota signalling substances and cognitive, language and motor development among three-year-old rural Ugandan children

  Iversen, P. O., Atukunda, P., Kort, R., Ueland, P. M., Westerberg, A. C. & Muhoozi, G. K. M., 29 Apr 2020, In: Acta Paediatrica. 109, 11, p. 2339-2341 3 p., apa.15330.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

• Quantitative analysis of amino acid metabolism in liver cancer links glutamate excretion to nucleotide synthesis

  Nilsson, A., Haanstra, J. R., Engqvist, M., Gerding, A., Bakker, B. M., Klingmüller, U., Teusink, B. & Nielsen, J., 12 May 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 19, p. 10294-10304 11 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Liver Neoplasms 100%
  • Glutamic Acid 87%
  • Glutamine 87%
  • Nucleotides 80%
  • Amino Acids 69%

• The A-ring reduction of 11-ketotestosterone is efficiently catalysed by AKR1D1 and SRD5A2 but not SRD5A1

  Barnard, L., Nikolaou, N., Louw, C., Schiffer, L., Gibson, H., Gilligan, L. C., Gangitano, E., Snoep, J., Arlt, W., Tomlinson, J. W. & Storbeck, K. H., Sep 2020, In: Journal of Steroid Biochemistry and Molecular Biology. 202, p. 1-10 10 p., 105724.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • 11-ketotestosterone 100%
  • 11-ketoandrosterone 40%
  • 11-ketoetiocholanolone 37%
  • Metabolism 31%
  • Androgens 29%
• 2019

  Adaption to glucose limitation is modulated by the pleotropic regulator CcpA, independent of selection pressure strength

  Price, C. E., Branco Dos Santos, F., Hesseling, A., Uusitalo, J. J., Bachmann, H., Benavente, V., Goel, A., Berkhout, J., Bruggeman, F. J., Marrink, S. J., Montalban-Lopez, M., De Jong, A., Kok, J., Molenaar, D., Poolman, B., Teusink, B. & Kuipers, O. P., 10 Jan 2019, In: BMC Evolutionary Biology. 19, 1, p. 1-15 15 p., 15.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • selection pressure 100%
  • strength (mechanics) 97%
  • glucose 89%
  • mutation 73%
  • fitness 72%

• Adopting traditional fermented foods as carriers for probiotics: The case of Obushera and Lactobacillus rhamnosus yoba

  Mukisa, I. M., Byakika, S., Meeme, R., Wacoo, A. P., Sybesma, W. & Kort, R., 17 Nov 2019, In: Nutrition and Food Science. 50, 5, p. 841-852 12 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Fermented Foods 100%
  • Lactobacillus rhamnosus 95%
  • fermented foods 83%
  • traditional foods 83%
  • Probiotics 72%

• Ample arsenite bio-oxidation activity in Bangladesh drinking water wells: A bonanza for bioremediation?

  Hassan, Z., Sultana, M., Khan, S. I., Braster, M., Röling, W. F. M. & Westerhoff, H. V., Aug 2019, In: Microorganisms. 7, 8, p. 1-22 22 p., 246.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Water Wells 100%
  • Environmental Biodegradation 85%
  • arsenite 81%
  • arsenite oxidase 73%
  • Bangladesh 69%

• Bacterial community dynamics in lait caillé, a traditional product of spontaneous fermentation from Senegal

  Groenenboom, A. E., Parker, M. E., De Vries, A., De Groot, S., Zobrist, S., Mansen, K., Milani, P., Kort, R., Smid, E. J. & Schoustra, S. E., 10 May 2019, In: PLoS ONE. 14, 5, e0215658.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Probiotics 100%
  • Senegal 71%
  • Fermentation 59%
  • bacterial communities 55%
  • probiotics 51%

• Biodegradation of metformin and its transformation product, guanylurea, by natural and exposed microbial communities

  Poursat, B. A. J., van Spanning, R. J. M., Braster, M., Helmus, R., de Voogt, P. & Parsons, J. R., 30 Oct 2019, In: Ecotoxicology and Environmental Safety. 182, p. 1-10 10 p., 109414.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Chemostats 100%
  • Biodegradability 83%
  • Biodegradation 83%
  • Metformin 64%
  • Microbiota 61%

• Child development, growth and microbiota: follow-up of a randomized education trial in Uganda

  Atukunda, P., Muhoozi, G. K. M., van den Broek, T. J., Kort, R., Diep, L. M., Kaaya, A. N., Iversen, P. O. & Westerberg, A. C., Jun 2019, In: Journal of global health. 9, 1, p. 1-11 11 p., 010431.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Uganda 100%
  • Child Development 87%
  • Microbiota 85%
  • Gastrointestinal Microbiome 85%
  • Mothers 53%

• Circular spectropolarimetric sensing of higher plant and algal chloroplast structural variations

  Patty, C. H. L., Ariese, F., Buma, W. J., ten Kate, I. L., van Spanning, R. J. M. & Snik, F., May 2019, In: Photosynthesis Research. 140, 2, p. 129-139 11 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

• Circular spectropolarimetric sensing of life

  Patty, C. H. L., 2019, 174 p.

  Research output: PhD Thesis › PhD-Thesis - Research and graduation internal

  Open Access

  File
  420 Downloads (Pure)

• Circular Spectropolarimetric Sensing of Vegetation in the Field: Possibilities for the Remote Detection of Extraterrestrial Life

  Patty, C. H. L., Ten Kate, I. L., Buma, W. J., Van Spanning, R. J. M., Steinbach, G., Ariese, F. & Snik, F., 3 Oct 2019, In: Astrobiology. 19, 10, p. 1221-1229 9 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Exobiology 100%
  • extraterrestrial life 89%
  • vegetation 71%
  • circular polarization 55%
  • polarization 43%

• Comparative genomics of human Lactobacillus crispatus isolates reveals genes for glycosylation and glycogen degradation: Implications for in vivo dominance of the vaginal microbiota

  Van Der Veer, C., Hertzberger, R. Y., Bruisten, S. M., Tytgat, H. L. P., Swanenburg, J., De Kat Angelino-Bart, A., Schuren, F., Molenaar, D., Reid, G., De Vries, H. & Kort, R., 29 Mar 2019, In: Microbiome. 7, 1, p. 1-14 14 p., 49.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  File

  • Lactobacillus crispatus 100%
  • Glycogen 59%
  • Glycosylation 59%
  • Microbiota 59%
  • Genomics 59%
  299 Downloads (Pure)

• Data Management in Computational Systems Biology: Exploring Standards, Tools, Databases, and Packaging Best Practices

  Stanford, N. J., Scharm, M., Dobson, P. D., Golebiewski, M., Hucka, M., Kothamachu, V. B., Nickerson, D., Owen, S., Pahle, J., Wittig, U., Waltemath, D., Goble, C., Mendes, P. & Snoep, J., 2019, Yeast Systems Biology: Methods and Protocols. Oliver, S. G. & Castrillo, J. I. (eds.). Humana Press Inc, p. 285-314 30 p. (Methods in Molecular Biology; vol. 2049).

  Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

  • Systems Biology 100%
  • Product Packaging 96%
  • Computational Biology 80%
  • Practice Guidelines 78%
  • Research Personnel 58%

• De hygiënehypothese onder de loep

  Croon, S., Rijkers, G., Budding, A., de Jong, E., Knol, E., Smits, H., Tool, B. & Kort, R., May 2019, In: Dutch Journal of Allergy, Asthma & Clinical Immunology (NTvAAKI). 19, p. 55-60 6 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  File

  • Hygiene Hypothesis 100%
  • Hypersensitivity 26%
  • Immune System 25%
  • Eczema 18%
  • Immune System Diseases 17%
  551 Downloads (Pure)

• Een praktische gids voor probiotica ter preventie van antibiotica-gerelateerde diarree in Nederland

  Agamennone, V., Krul, C., Rijkers, G. & Kort, R., 8 Feb 2019, In: Pharmaceutisch Weekblad. 154, 6, p. 17-24 8 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  File

  • Probiotics 100%
  • Netherlands 89%
  • Diarrhea 76%
  • Anti-Bacterial Agents 60%
  • Lactobacillus rhamnosus 20%
  363 Downloads (Pure)

• Eighth annual conference of in VIVO planetary health: From challenges to opportunities

  VIVO Planetary Health of the Worldwide Universities Network (WUN), 5 Nov 2019, In: International Journal of Environmental Research and Public Health. 16, 21, p. 1-62 62 p., 4302.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Congresses 100%
  • Health 74%
  • Urban Renewal 57%
  • Planets 51%
  • Creativity 43%

• Genome annotation and antimicrobial properties of Bacillus toyonensis VU-DES13, isolated from the Folsomia candida gut

  Agamennone, V., van Straalen, J., Brouwer, A., de Boer, T. E., Hensbergen, P. J., Zaagman, N., Braster, M., van Straalen, N. M., Roelofs, D. & Janssens, T. K. S., Mar 2019, In: Entomologia experimentalis et applicata. 167, 3, p. 269-285 17 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Bacillus toyonensis 100%
  • Folsomia candida 77%
  • antimicrobial properties 54%
  • genome 48%
  • antibiotic resistance 48%

• Harmonizing semantic annotations for computational models in biology

  Neal, M. L., König, M., Nickerson, D., Misirli, G., Kalbasi, R., Dräger, A., Atalag, K., Chelliah, V., Cooling, M. T., Cook, D. L., Crook, S., De Alba, M., Friedman, S. H., Garny, A., Gennari, J. H., Gleeson, P., Golebiewski, M., Hucka, M., Juty, N., Myers, C. & 8 others, Olivier, B. G., Sauro, H. M., Scharm, M., Snoep, J. L., Touré, V., Wipat, A., Wolkenhauer, O. & Waltemath, D., 22 Mar 2019, In: Briefings in bioinformatics. 20, 2, p. 540-550 11 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Semantics 100%
  • Biota 30%
  • Research Personnel 27%
  • Biological Science Disciplines 24%
  • Theoretical Models 15%

• Identifying indigenous practices for cultivation of wild saprophytic mushrooms: responding to the need for sustainable utilization of natural resources

  Wendiro, D., Wacoo, A. P. & Wise, G., 12 Dec 2019, In: Journal of Ethnobiology and Ethnomedicine. 15, 1, p. 1-15 15 p., 64.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Natural Resources 100%
  • Agaricales 82%
  • natural resources 72%
  • mushrooms 64%
  • Musa 52%