Molecular Cell Physiology

Research Output

Filter
Article
1995

Isolation and characterization of a novel insertion sequence element, IS1248, in Paracoccus denitrificans

Van Spanning, R. J., De Boer, A. P., Slotboom, D. J., Reijnders, W. N. & Stouthamer, A. H., Jul 1995, In : Plasmid. 34, 1, p. 11-21 11 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Mutational analysis of mau genes involved in methylamine metabolism in Paracoccus denitrificans

van der Palen, C. J. N. M., Slotboom, D. J., Jongejan, L., Reijnders, W. N., Harms, N., Duine, J. A. & van Spanning, R. J., 15 Jun 1995, In : European Journal of Biochemistry. 230, 3, p. 860-71 12 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Nicotinate catabolism is dispensable and nicotinate anabolism is crucial in Azorhizobium caulinodans growing in batch culture and chemostat culture on N2 as The N source

Pronk, A. F., Stouthamer, A. H., Van Verseveld, H. W. & Boogerd, F. C., Jan 1995, In : Journal of Bacteriology. 177, 1, p. 75-81 7 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Nitrite and nitric oxide reduction in Paracoccus denitrificans is under the control of NNR, a regulatory protein that belongs to the FNR family of transcriptional activators

Van Spanning, R. J., De Boer, A. P., Reijnders, W. N., Spiro, S., Westerhoff, H. V., Stouthamer, A. H. & van der Oost, J., 27 Feb 1995, In : FEBS Letters. 360, 2, p. 151-4 4 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Reversed electron transfer through the bc1 complex enables a cytochrome c oxidase mutant (delta aa3/cbb3) of Paracoccus denitrificans to grow on methylamine

van der Oost, J., Schepper, M., Stouthamer, A. H., Westerhoff, H. V., van Spanning, R. J. & de Gier, J-W., 11 Sep 1995, In : FEBS Letters. 371, 3, p. 267-70 4 p.

Research output: Contribution to JournalArticleAcademicpeer-review

The relationship between the in situ reduction level of the cytochrome c pool of Azorhizobium caulinodans growing in a chemostat with NH4+ or N2 as the N source and the total activity of cytochrome c oxidases

Pronk, AF., Affourtit, C., Mashingaidze, C., Stouthamer, AH., van Verseveld, HW. & Boogerd, F. C., 1995, In : FEMS Microbiology Letters. 129, p. 149-156 8 p.

Research output: Contribution to JournalArticleAcademicpeer-review

1994

Expression of the mau genes involved in methylamine metabolism in Paracoccus denitrificans is under control of a LysR-type transcriptional activator

Van Spanning, R. J., van der Palen, C. J. N. M., Slotboom, D. J., Reijnders, W. N., Stouthamer, A. H. & Duine, J. A., 15 Nov 1994, In : European Journal of Biochemistry. 226, 1, p. 201-10 10 p.

Research output: Contribution to JournalArticleAcademicpeer-review

HOW TO DETERMINE CONTROL OF GROWTH-RATE IN A CHEMOSTAT - USING METABOLIC CONTROL ANALYSIS TO RESOLVE THE PARADOX

Snoep, J. L., Jensen, P. R., GROENEVELD, P., MOLENAAR, D., Kholodenko, B. N. & Westerhoff, H. V., Aug 1994, In : BIOCHEMISTRY AND MOLECULAR BIOLOGY INTERNATIONAL. 33, 5, p. 1023-1032

Research output: Contribution to JournalArticleAcademicpeer-review

Isolation, sequencing and mutational analysis of a gene cluster involved in nitrite reduction in Paracoccus denitrificans

de Boer, A. P., Reijnders, W. N., Kuenen, J. G., Stouthamer, A. H. & van Spanning, R. J., 1994, In : Antonie van Leeuwenhoek. 66, 1-3, p. 111-27 17 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Molecular and comparative analysis of the hyperthermostable pyrococcus furiosus glutamate dehydrogenase and its gene

Eggen, R. I. L., Geerling, A. C. M., Voorhorst, W. G. B., Kort, R. & de Vos, W. M., 1994, In : Biocatalysis and Biotransformation. 11, 2, p. 131-141 11 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Nitrogen Fixation and Hydrogen Metabolism in Relation to the Dissolved Oxygen Tension in Chemostat Cultures of the Wild Type and a Hydrogenase-Negative Mutant of Azorhizobium caulinodans

Boogerd, F. C., Ferdinandy-van Vlerken, M. M., Mawadza, C., Pronk, A. F., Stouthamer, A. H. & van Verseveld, H. W., Jun 1994, In : Applied and Environmental Microbiology. 60, 6, p. 1859-66 8 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Siderophore production by Bradyrhizobiumspp. strains nodulating groundnut

van Rossum, D., Muyotcha, A., van Verseveld, HW., Stouthamer, AH. & Boogerd, F. C., 1994, In : Plant and Soil. 163

Research output: Contribution to JournalArticleAcademicpeer-review

Soil acidity in relation to groundnut-Bradyrhizobiumsymbiotic performance

van Rossum, D., Muyotcha, A., de Hoop, B., van Verseveld, HW., Stouthamer, AH. & Boogerd, F. C., 1994, In : Plant and Soil. 163, p. 165 175 p.

Research output: Contribution to JournalArticleAcademicpeer-review

The terminal oxidases of Paracoccus denitrificans

de Gier, J-W., Lübben, M., Reijnders, W. N., Tipker, C. A., Slotboom, D. J., van Spanning, R. J., Stouthamer, A. H. & van der Oost, J., Jul 1994, In : Molecular Microbiology. 13, 2, p. 183-96 14 p.

Research output: Contribution to JournalArticleAcademicpeer-review

1993

Effects of Bradyrhizobiumstrain and host genotype, nodule dry weight and leaf area on groundnut (Arachis hypogaea L. ssp. fastigiata) yield

van Rossum, D., Muyotcha, A., van Verseveld, H. W., Stouthamer, A. H. & Boogerd, F. C., 1993, In : Plant and Soil. 154, p. 279-288 10 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Identification of a two-component regulatory system controlling methanol dehydrogenase synthesis in Paracoccus denitrificans

Harms, N., Reijnders, W. N., Anazawa, H., van der Palen, C. J. N. M., van Spanning, R. J., Oltmann, L. F. & Stouthamer, A. H., May 1993, In : Molecular Microbiology. 8, 3, p. 457-70 14 p.

Research output: Contribution to JournalArticleAcademicpeer-review

In situ determination of the reduction levels of cytochromes b and c in growing bacteria: a case study with N2-fixing Azorhizobium caulinodans

Pronk, A. F., Boogerd, F. C., Stoof, C., Oltmann, L. F., Stouthamer, A. H. & van Verseveld, H. W., Oct 1993, In : Analytical Biochemistry. 214, 1, p. 149-55 7 p.

Research output: Contribution to JournalArticleAcademicpeer-review

1991

A method for introduction of unmarked mutations in the genome of Paracoccus denitrificans: construction of strains with multiple mutations in the genes encoding periplasmic cytochromes c550, c551i, and c553i

Van Spanning, R. J., Wansell, C. W., Reijnders, W. N., Harms, N., van Ras, N. J. P., Oltmann, L. F. & Stouthamer, A. H., Nov 1991, In : Journal of Bacteriology. 173, 21, p. 6962-70 9 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Relative contributions of biological and chemical reactions to the overall rate of pyrite oxidation at temperatures between 30 degrees C and 70 degrees C

Boogerd, F. C., van den Beemd, C., Stoelwinder, T., Bos, P. & Kuenen, J. G., 20 Jun 1991, In : Biotechnology and Bioengineering. 38, 2, p. 109-15 7 p.

Research output: Contribution to JournalArticleAcademicpeer-review

1990

CONTROL OF TEMPERATURE-DEPENDENT SYNTHESIS OF K99 FIMBRIAE

VANDERWOUDE, MW., BRASTER, M., VANVERSEVELD, HW. & DEGRAAF, FK., 1 Mar 1990, In : FEMS Microbiology Letters. 68, 1-2, p. 183-188

Research output: Contribution to JournalArticleAcademicpeer-review

Effects of oxygen radical scavengers on the inactivation of SS phi X174 DNA by the semi-quinone free radical of the antitumor agent etoposide

van Maanen, M. J., Mans, D. R. A., Lafleur, M. V. M., Van Schaik, M. A., de Vries, J., Vermeulen, N. P., Retèl, J. & Lankelma, J., 1990, In : Free radical research communications. 9, 2, p. 69-86 18 p.

Research output: Contribution to JournalArticleAcademicpeer-review

EFFECTS OF OXYGEN RADICAL SCAVENGERS ON THE INACTIVATION OF SS-PHI-X174 DNA BY THE SEMIQUINONE FREE-RADICAL OF THE ANTITUMOR AGENT ETOPOSIDE

VANMAANEN, JMS., Mans, D. R. A., Lafleur, M. V. M., VANSCHAIK, MA., DeVries, J., VERMEULEN, NPE., Retel, J. & LANKELMA, J., 1990, In : Free radical research communications. 9, 2, p. 69-86

Research output: Contribution to JournalArticleProfessional

Floating filters, a novel technique for isolation and enumeration of fastidious, acidophilic, iron-oxidizing, autotrophic bacteria

de Bruyn, J. C., Boogerd, F. C., Bos, P. & Kuenen, J. G., Sep 1990, In : Applied and Environmental Microbiology. 56, 9, p. 2891-4 4 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Mutagenesis of the gene encoding amicyanin of Paracoccus denitrificans and the resultant effect on methylamine oxidation

van Spanning, R. J., Wansell, C. W., Reijnders, W. N., Oltmann, L. F. & Stouthamer, A. H., 26 Nov 1990, In : FEBS Letters. 275, 1-2, p. 217-20 4 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Oxygen and carbon dioxide mass transfer and the aerobic, autotrophic cultivation of moderate and extreme thermophiles: a case study related to the microbial desulfurization of coal

Boogerd, F. C., Bos, P., Kuenen, J. G., Heijnen, J. & van der Lans, R. G., May 1990, In : Biotechnology and Bioengineering. 35, 11, p. 1111-9 9 p.

Research output: Contribution to JournalArticleAcademicpeer-review

1987

ISOLATION AND CHARACTERIZATION OF UBIQUINOL OXIDASE COMPLEXES FROM PARACOCCUS-DENITRIFICANS CELLS CULTURED UNDER VARIOUS LIMITING GROWTH-CONDITIONS IN THE CHEMOSTAT

BOSMA, G., BRASTER, M., STOUTHAMER, AH. & VANVERSEVELD, HW., 15 Jun 1987, In : European Journal of Biochemistry. 165, 3, p. 657-663

Research output: Contribution to JournalArticleAcademicpeer-review

Manganese oxidation by Leptothrix discophora

Boogerd, F. C. & de Vrind, J. P., Feb 1987, In : Journal of Bacteriology. 169, 2, p. 489-94 6 p.

Research output: Contribution to JournalArticleAcademicpeer-review

SUBFRACTIONATION AND CHARACTERIZATION OF SOLUBLE C-TYPE CYTOCHROMES FROM PARACOCCUS-DENITRIFICANS CULTURED UNDER VARIOUS LIMITING CONDITIONS IN THE CHEMOSTAT

BOSMA, G., BRASTER, M., STOUTHAMER, AH. & VANVERSEVELD, HW., 15 Jun 1987, In : European Journal of Biochemistry. 165, 3, p. 665-670

Research output: Contribution to JournalArticleAcademicpeer-review

1986

Manganese oxidation by spores and spore coats of a marine bacillus species

de Vrind, J. P., de Vrind-de Jong, E. W., de Voogt, J. W., Westbroek, P., Boogerd, F. C. & Rosson, R. A., Nov 1986, In : Applied and Environmental Microbiology. 52, 5, p. 1096-100 5 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Manganese reduction by a marine Bacillus species

de Vrind, J. P., Boogerd, F. C. & de Vrind-de Jong, E. W., Jul 1986, In : Journal of Bacteriology. 167, 1, p. 30-4 5 p.

Research output: Contribution to JournalArticleAcademicpeer-review

MODELING OF MICROBIAL SUBSTRATE CONVERSION, GROWTH AND PRODUCT FORMATION IN A RECYCLING FERMENTER

VANVERSEVELD, HW., DEHOLLANDER, JA., FRANKENA, J., BRASTER, M., LEEUWERIK, FJ. & STOUTHAMER, AH., 1986, In : Antonie van Leeuwenhoek. 52, 4, p. 325-342

Research output: Contribution to JournalArticleAcademicpeer-review

PROTON-MOTIVE FORCE DURING GROWTH OF ESCHERICHIA-COLI IN THE RECYCLING FERMENTER

VANVERSEVELD, HW., BRASTER, M., KASHKET, ER. & STOUTHAMER, AH., 7 Jul 1986, In : FEBS Letters. 202, 2, p. 319-322

Research output: Contribution to JournalArticleAcademicpeer-review

The functional localization of cytochromes b in the respiratory chain of anaerobically grown Proteus mirabilis

Van Wielink, J. E., Reijnders, W. N., Van Spanning, R. J., Oltmann, L. F. & Stouthamer, A. H., 1986, In : Antonie van Leeuwenhoek. 52, 2, p. 105-16 12 p.

Research output: Contribution to JournalArticleAcademicpeer-review

1984

EUBACTERIA HAVE 3 GROWTH MODES KEYED TO NUTRIENT FLOW - CONSEQUENCES FOR THE CONCEPT OF MAINTENANCE AND MAXIMAL GROWTH-YIELD

VANVERSEVELD, HW., CHESBRO, WR., BRASTER, M. & STOUTHAMER, AH., 1984, In : Archives of Microbiology. 137, 2, p. 176-184

Research output: Contribution to JournalArticleAcademicpeer-review

RECONSIDERATION OF THE EFFICIENCY OF ENERGY TRANSDUCTION IN PARACOCCUS-DENITRIFICANS DURING GROWTH UNDER A VARIETY OF CULTURE CONDITIONS - A NEW APPROACH FOR THE CALCULATION OF P/2E-RATIOS

Boogerd, F. C., VANVERSEVELD, HW., TORENVLIET, D., BRASTER, M. & Stouthamer, A. H., 1984, In : Archives of Microbiology. 139, 4, p. 344-350

Research output: Contribution to JournalArticleAcademicpeer-review

1983

Dissimilatory nitrate uptake in Paracoccus denitrificans via a ΔµH+-dependent system and a nitrate-nitrite antiport system

Boogerd, F. C., Van Verseveld, H. W. & Stouthamer, A. H., 30 Jun 1983, In : Biochimica et Biophysica Acta (BBA) - Bioenergetics. 723, 3, p. 415-427 13 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Effects of electron transport inhibitors and uncouplers on denitrification in Paracoccus denitrificans

Boogerd, F. C., Appeldoorn, K. J. & Stouthamer, A. H., 1983, In : FEMS Microbiology Letters. 20, 3, p. 455-460 6 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Energetic aspects of growth of Paracoccus denitrificans: oxygen-limitation and shift from anaerobic nitrate-limination to aerobic succinate-limitation - Evidence for a new alternative oxidase, cytochrome a1

van Verseveld, H. W., Braster, M., Boogerd, F. C., Chance, B. & Stouthamer, A. H., Sep 1983, In : Archives of Microbiology. 135, 3, p. 229-236 8 p.

Research output: Contribution to JournalArticleAcademicpeer-review

1982

The bioenergetics of denitrification

Stouthamer, A. H., Boogerd, F. C. & van Verseveld, H. W., 1982, In : Antonie van Leeuwenhoek. 48, 6, p. 545-53 9 p.

Research output: Contribution to JournalArticleAcademicpeer-review

1981

Respiration-driven proton translocation with nitrite and nitrous oxide in Paracoccus denitrificans

Boogerd, F. C., Van Verseveld, H. W. & Stouthamer, A. H., 14 Dec 1981, In : Biochimica et Biophysica Acta. 638, 2, p. 181-91 11 p.

Research output: Contribution to JournalArticleAcademicpeer-review

1980

Electron transport to nitrous oxide in Paracoccus denitrificans

Boogerd, F. C., van Verseveld, H. W. & Stouthamer, A. H., 5 May 1980, In : FEBS Letters. 113, 2, p. 279-84 6 p.

Research output: Contribution to JournalArticleAcademicpeer-review

1978

Effects induced by rotenone during aerobic growth of Paracoccus denitrificans in continuous culture. Changes in energy conservation and electron transport associated with NADH dehydrogenase

Meijer, E. M., Schuitenmaker, M. G., Boogerd, F. C., Wever, E. R. & Stouthamer, A. H., 13 Nov 1978, In : Archives of Microbiology. 119, 2, p. 119-27 9 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Limited proteolysis of cloacin DF13 and characterization of the cleavage products

de Graaf, F. K., Stukart, M. J., Boogerd, F. C. & Metselaar, K., 21 Mar 1978, In : Biochemistry. 17, 6, p. 1137-42 6 p.

Research output: Contribution to JournalArticleAcademicpeer-review