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Research Output 1994 2019

2019

A boxology of design patterns for hybrid learning and reasoning systems

van Harmelen, F. & Ten Teije, A., 8 Nov 2019, BNAIC/BENELEARN 2019 Proceedings of the Reference AI & ML Conference for Belgium, Netherlands & Luxemburg : Proceedings of the 31st Benelux Conference on Artificial Intelligence (BNAIC 2019) and the 28th Belgian Dutch Conference on Machine Learning (Benelearn 2019) Brussels, Belgium, November 6-8, 2019. Beuls, K., Bogaerts, B., Bontempi, G., Geurts, P., Harley, N., Lebichot, B., Lenaerts, T., Louppe, G. & Van Eecke, P. (eds.). CEUR-WS, p. 1-2 2 p. (CEUR Workshop Proceedings; vol. 2491).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Knowledge engineering
Knowledge representation
Computer science
Learning systems
Software engineering

A Boxology of Design Patterns for Hybrid Learning and Reasoning Systems

van Harmelen, F. & ten Teije, A., Jan 2019, In : JOURNAL OF WEB ENGINEERING. 18, 1-3, p. 97-123 27 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Preface

Riaño, D., Wilk, S. & ten Teije, A., 2019, Artificial Intelligence in Medicine: 17th Conference on Artificial Intelligence in Medicine, AIME 2019, Poznan, Poland, June 26–29, 2019, Proceedings. Springer, p. v-vii 3 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11526 LNAI).

Research output: Chapter in Book / Report / Conference proceedingForeword/postscriptAcademic

Preface

Koch, F., Koster, A., Bichindaritz, I., Herrero, P., Riaño, D., Montagna, S., Schumacher, M., ten Teije, A., Guttmann, C., Reichert, M., Lenz, R., López, B., Marling, C., Martin, C., Montani, S. & Wiratunga, N., Jul 2019, Artificial Intelligence in Health: First International Workshop, AIH 2018Stockholm, Sweden, July 13–14, 2018 - Revised Selected Papers. Koch, F., Koster, A., Bichindaritz, I. & Herrero, P. (eds.). Cham: Springer, p. VII-VIII 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11326).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Ten years of knowledge representation for health care (2009–2018): Topics, trends, and challenges

Riaño, D., Peleg, M. & ten Teije, A., Sep 2019, In : Artificial Intelligence in Medicine. 100, p. 1-12 12 p., 101713.

Research output: Contribution to JournalReview articleAcademicpeer-review

Knowledge representation
Health care
Guidelines
Delivery of Health Care
Ontology
2018

Filtering clinical guideline interactions with pre-conditions: A case study on diabetes guideline

Zamborlini, V., van der Heijden, R. & ten Teije, A., 29 Oct 2018, p. 1-8. 8 p.

Research output: Contribution to ConferencePaperAcademic

Open Access
File
Medical problems

Preface: AIME 2017

ten Teije, A., Popow, C., Holmes, J. H. & Sacchi, L., Sep 2018, In : Artificial Intelligence in Medicine. 91, p. 1-2 2 p.

Research output: Contribution to JournalEditorialAcademicpeer-review

Open Access
File
2017

Analyzing interactions on combining multiple clinical guidelines

Zamborlini, V., Da Silveira, M., Pruski, C., ten Teije, A., Geleijn, E., van der Leeden, M., Stuiver, M. & van Harmelen, F., 21 Mar 2017, In : Artificial Intelligence in Medicine.

Research output: Contribution to JournalArticleAcademicpeer-review

Reusability
Knowledge representation
Patient rehabilitation
Scalability
Health

Detecting New Evidences for Evidence-Based Medical Guidelines with Journal Filtering

Hu, Q., Huang, Z., ten Teije, A. & van Harmelen, F., 2017, Knowledge Representation for Health Care: HEC 2016 International Joint Workshop, KR4HC/ProHealth 2016, Munich, Germany, September 2, 2016, Revised Selected Papers. Riaño, D., Lenz, R. & Reichert, M. (eds.). Cham: Springer/Verlag, Vol. 10096 LNAI. p. 120-132 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10096 LNAI).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Filtering
Search engines
Health care
Updating
Recommendations

Formalization and Computation of Diabetes Quality Indicators with Patient Data from a Chinese Hospital

Liu, H., ten Teije, A., Dentler, K., Ma, J. & Zhang, S., 2017, Knowledge Representation for Health Care: HEC 2016 International Joint Workshop, KR4HC/ProHealth 2016, Munich, Germany, September 2, 2016, Revised Selected Papers. Riaño, D., Lenz, R. & Reichert, M. (eds.). Springer/Verlag, Vol. 10096 LNAI. p. 23-35 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10096 LNAI).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Diabetes
Medical problems
Electronic medical equipment
Formalization
Electronics

Generalizing the Detection of Clinical Guideline Interactions Enhanced with LOD

Carretta Zamborlini, V., Hoekstra, R., Da Silveira, M., Pruski, C., ten Teije, A. & van Harmelen, F., 2017, Biomedical Engineering Systems and Technologies: 9th International Joint Conference, BIOSTEC 2016, Rome, Italy, February 21--23, 2016, Revised Selected Papers. Fred, A. & Gamboa, H. (eds.). Cham: Springer International Publishing Switzerland, p. 360-386 27 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Knowledge-Driven Paper Retrieval to Support Updating of Clinical Guidelines

Carretta Zamborlini, V., Hu, Q., Huang, Z., Da Silveira, M., Pruski, C., ten Teije, A. C. M. & van Harmelen, F. A. H., 2017, Knowledge Representation for Health Care: HEC 2016 International Joint Workshop, KR4HC/ProHealth 2016, Munich, Germany, September 2, 2016, Revised Selected Papers. Riaño, D., Lenz, R. & Reichert, M. (eds.). Cham: Springer International Publishing Switzerland, p. 71-89 19 p.

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Knowledge Representation for Clinical Guidelines: with applications to Multimorbidity Analysis and Literature Search

Carretta Zamborlini, V., 2017, 238 p.

Research output: PhD ThesisPhD Thesis - Research VU, graduation VUAcademic

Open Access
File
2016

A Task-based Comparison of Linguistic and Semantic Document Retrieval Methods in the Medical Domain

Shafahi, M., Hu, Q., Afsarmanesh, H., Huang, Z., ten Teije, A. C. M. & van Harmelen, F. A. H., 2016, In : CEUR Workshop Proceedings. 1613

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Linguistics
Semantics
Experiments

A topic-centric approach to detecting new evidences for evidence-based medical guidelines

Hu, Q., Huang, Z., ten Teije, A., van Harmelen, F., Marshall, M. S. & Dekker, A., 2016, HEALTHINF 2016 - 9th International Conference on Health Informatics, Proceedings; Part of 9th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2016. SciTePress, p. 282-289 8 p.

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Search engines
Experiments

Generalizing the Detection of Internal and External Interactions in Clinical Guidelines

Carretta Zamborlini, V., Hoekstra, R., Da Silveira, M., Pruski, C., ten Teije, A. & van Harmelen, F., 2016, HEALTHINF 2016 - 9th International Conference on Health Informatics, Proceedings; Part of 9th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2016. SciTePress, p. 105-116 12 p.

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Medical problems
Merging

Inferring recommendation interactions in clinical guidelines

Carretta Zamborlini, V., Hoekstra, R., Da Silveira, M., Pruski, C., ten Teije, A. C. M. & van Harmelen, F. A. H., 2016, In : Semantic Web. 7, 4, p. 421-446 26 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Drug interactions
Medical problems
Semantic Web

Knowledge Services Using Rule-Based Formalization for Eligibility Criteria of Clinical Trials

Huang, Z., Hu, Q., ten Teije, A. C. M., van Harmelen, F. A. H. & Ait-Mokhtar, S., 2016, Health Information Science - 5th International Conference, HIS 2016, Proceedings. Springer/Verlag, Vol. 10038 LNCS. p. 49-61 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10038 LNCS).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Logic programming
Reusability
Terminology
Formalization
Clinical Trials

Predictive modeling of colorectal cancer using a dedicated pre-processing pipeline on routine electronic medical records

Kop, R., Hoogendoorn, M., ten Teije, A., Büchner, F. L., Slottje, P., Moons, L. M. G. & Numans, M. E., 1 Sep 2016, In : Computers in Biology and Medicine. 76, p. 30-38 9 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Electronic medical equipment
Electronic Health Records
Colorectal Neoplasms
Pipelines
Processing

SWISH for prototyping clinical guideline interactions theory

Carretta Zamborlini, V., Wielemaker, J., Da Silveira, M., Pruski, C., ten Teije, A. & van Harmelen, F. A. H., 2016, In : CEUR Workshop Proceedings. 1795

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Semantic Web
Experiments
2015

{Knowledge Representation for Health Care (AIME 2015 International Joint Workshop, KR4HC/ProHealth 2015)

Riano, D., Lenz, R., Miksch, S., Peleg, M., Reichert, M. & ten Teije, A. C. M., 2015, Berlin: Springer. 145 p. (LNAI; no. 9485)

Research output: Book / ReportBookAcademicpeer-review

A Compact In-Memory Dictionary for RDF data

Bazoubandi, H. R., de Rooij, S., Urbani, J., ten Teije, A., van Harmelen, F. & Bal, H., 2015, The Semantic Web: Latest Advances and New Domains - 12th European Semantic Web Conference, ESWC 2015, Proceedings. Springer/Verlag, Vol. 9088. p. 205-220 16 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9088).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Glossaries
Data storage equipment
Prefix
Data structures
Data Structures

Analyzing Recommendations Interactions in Clinical Guidelines: Impact of action type hierarchies and causation beliefs

Carretta Zamborlini, V., Da Silveira, M., Pruski, C., ten Teije, A. & van Harmelen, F., 2015, Artificial Intelligence in Medicine - 15th Conference on Artificial Intelligence in Medicine, AIME 2015, Proceedings. Springer/Verlag, Vol. 9105. p. 317-326 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9105).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Clinical Guidelines
Causation
Reusability
Scalability
Recommendations

Detecting New Evidence for Evidence-based Guidelines Using a Semantic Distance Method

Hu, Q., Huang, Z., ten Teije, A. C. M. & van Harmelen, F. A. H., 2015, Proceedings 15th Conference on Artificial Intelligence in Medicine. Berlin: Springer, p. 307-316

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Enhancing reuse of structured eligibility criteria and supporting their relaxation.

Milian, K., Hoekstra, R., Bucur, A., ten Teije, A. C. M., van Harmelen, F. A. H. & Paulissen, J., 2015, In : Journal of Biomedical Informatics. 56, p. 205-219 15 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Ontology
Visualization
Navigation
Semantics
Libraries

Finding Evidence for Updates in Medical Guidelines

Reinders, R., ten Teije, A. & Huang, Z., 2015, HEALTHINF 2015 - 8th International Conference on Health Informatics, Proceedings; Part of 8th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2015. SciTePress, p. 91-102 12 p.

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Guidelines
Search engines
Biomedical Research
Search Engine
Feasibility Studies

Identification of patients at risk for colorectal cancer in primary care: an explorative study with routine healthcare data

Koning, N. R., Moons, L. N. G., Büchner, F. L., Helsper, C. W., ten Teije, A. C. M. & Numans, M. E., 2015, In : European Journal of Gastroenterology and Hepatology. 27, 12, p. 1443-1448

Research output: Contribution to JournalArticleAcademicpeer-review

Colonoscopy
Colorectal Neoplasms
Primary Health Care
Delivery of Health Care
General Practitioners

Identifying Evidence Quality for Updating Evidence-based Medical Guidelines

Huang, Z., Hu, Q., ten Teije, A. C. M. & van Harmelen, F. A. H., 2015, Knowledge Representation for Health Care, AIME 2015 International Joint Workshop, KR4HC/ProHealth 2015. Riano, D., Lenz, R., Miksch, S., Peleg, M., Reichert, M. & ten Teije, A. C. M. (eds.). Springer, p. 51-64

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Inferring Recommendation Interactions in Clinical Guidelines: Case-studies on Multimorbidity

Zamborlini, V., Hoekstra, R., da Silveira, M., Pruski, C. & ten Teije, A. C. M., 2015, In : Semantic Web.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
File

On the Advantage of Using Dedicated Data Mining Techniques to Predict Colorectal Cancer

Kop, R., Hoogendoorn, M., Moons, L. N. G., Numans, M. E. & ten Teije, A. C. M., 2015, In : Lecture Notes in Computer Science. 9105, p. 133-142

Research output: Contribution to JournalArticleAcademicpeer-review

2014

A Conceptual Model for Detecting Interactions among Medical Recommendations in Clinical Guidelines

Carretta Zamborlini, V., Da Silveira, M., Pruski, C., Hoekstra, R., ten Teije, A. & van Harmelen, F., 2014, Knowledge Engineering and Knowledge Management - 19th International Conference, EKAW 2014, Proceedings. Vol. 8876. p. 591-606 16 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8876).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Clinical Guidelines
Conceptual Model
Recommendations
Medical problems
Interaction

Computing Healthcare Quality Indicators Automatically: Secondary Use of Patient Data and Semantic Interoperability

Dentler, K., 2014

Research output: PhD ThesisPhD Thesis - Research VU, graduation VUAcademic

Open Access
File

Evidence-based clinical guidelines in SemanticCT

Hu, Q., Huang, Z., van Harmelen, F. A. H., ten Teije, A. C. M. & Gu, J., 2014, 8th China Semantic Web Symposium & 3rd Web Science Conference (CSWS2014).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Feasibility Estimation for Clinical Trials

Huang, Z., van Harmelen, F. A. H., ten Teije, A. C. M. & Dekker, A., 2014, Proceedings of the 7th International Conference on Health Informatics (HEALTHINF2014).. scitepress digital library, p. 68-77

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Formalization and computation of quality measures based on electronic medical records

Dentler, K., Numans, M. E., ten Teije, A. C. M., Cornet, R. & de Keizer, N. F., 1 Mar 2014, In : Journal of the American Medical Informatics Association. 21, 2, p. 285-291 7 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
File
Electronic Health Records
Language
General Practice
Process Assessment (Health Care)
Outcome Assessment (Health Care)

Influence of data quality on computed Dutch hospital quality indicators: a case study in colorectal cancer surgery.

Dentler, K., Cornet, R., ten Teije, A. C. M., Tanis, P., Klinkenbijl, J., Tytgat, K. & de Keizer, N. F., 2014, In : BMC Medical Informatics and Decision Making. 14, 32

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Colorectal Surgery
Electronic Health Records
Colorectal Neoplasms
Data Accuracy
Cross-Sectional Studies

Knowledge Representation for Health Care (6th International Workshop, KR4HC 2014)

Miksch, S. (ed.), Riano, D. (ed.) & ten Teije, A. C. M. (ed.), 2014, Berlin: Springer. 175 p. (Lecture Notes CS; no. Vol. 8903)

Research output: Book / ReportBook editingAcademic

Semantic Representation of Evidence-based Clinical Guidelines

Huang, Z., Harmelen, F. V., ten Teije, A. & Aït-Mokhtar, S., 2014, Knowledge Representation for Health Care: 6th International Workshop, KR4HC 2014, held as part of the Vienna Summer of Logic, VSL 2014, Vienna, Austria, July 21, 2014. Revised Selected Papers. Miksch, S. & Riano, D. (eds.). Springer, Vol. 8903. p. 78-94 17 p. (Lecture Notes in Computer Science book series (LNCS) ; vol. 8903).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Semantic Web
Semantics
Processing

Supporting trial recruitment and design by automatically interpreting eligibility criteria

Milian, K., 2014

Research output: PhD ThesisPhD Thesis - Research VU, graduation VUAcademic

Open Access
File

Towards a Conceptual Model for Enhancing Reasoning about Clinical Guidelines: A case-study on Comorbidity

Carretta Zamborlini, V., Da Silveira, M., Pruski, C., ten Teije, A. & van Harmelen, F., 2014, Knowledge Representation for Health Care - 6th International Workshop, KR4HC 2014, Revised Selected Papers. Springer/Verlag, Vol. 8903. p. 29-44 16 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8903).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Clinical Guidelines
Conceptual Model
Reasoning
Use Case
Computer programming languages
2013

A Semantically-Enabled System for Clinical Trials

Huang, Z., ten Teije, A. C. M. & van Harmelen, F. A. H., 2013.

Research output: Contribution to ConferenceAbstractOther research output

File

Automated generation of patient-tailored electronic care pathways by translating computer-interpretable guidelines into hierarchical task networks

González-Ferrer, A., ten Teije, A. C. M., Fdez-Olivares, J. & Milian, K., Feb 2013, In : Artificial Intelligence in Medicine. 57, 2, p. 91-109 19 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Guidelines
Planning
Clinical Protocols
Scheduling
Patient treatment

Barriers to the reuse of routinely recorded clinical data: a field report

Dentler, K., ten Teije, A., De Keizer, N. F. & Cornet, R., 2013, MEDINFO 2013: Proceedings of the 14th World Congress on Medical and Health Informatics. Lehmann, C. U. (ed.). IOS Press, p. 313-317 5 p. (Studies in Health Technology and Informatics; vol. 192).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Open Access
File
Colorectal Surgery
Electronic Health Records
Colorectal Neoplasms

Identifying most relevant concepts to describe clinical trial eligibility criteria

Milian, K., Bucur, A., van Harmelen, F. A. H. & ten Teije, A. C. M., 2013, International Conference on Health Informatics (HEALTHINF 2013).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

File

Knowledge-based Patient Data Generation

Huang, Z., van Harmelen, F. A. H., ten Teije, A. C. M. & Dentler, K., 2013, In : Lecture Notes in Computer Science. 8268, p. 11-25

Research output: Contribution to JournalArticleAcademicpeer-review

File

Process support and knowledge representation in health care

Riano, D. (ed.), Lenz, R. (ed.), Miksch, S. (ed.), Peleg, M. (ed.), Reichert, M. (ed.) & ten Teije, A. C. M. (ed.), 2013, Berlin: Springer. (Lecture Notes CS; no. 8268)

Research output: Book / ReportBook editingAcademic

Process Support and Knowledge Representation in Health Care

Lenz, R., Miksch, S., Peleg, M., Reichert, M., Riano, D. & ten Teije, A. C. M., 2013, Berlin: Springer Berlin Heidelberg. (Lecture Notes in Computer Science; no. 7738)

Research output: Book / ReportBookAcademicpeer-review

Rule-based Formalization of Eligibility Criteria for Clinical Trials

Huang, Z., ten Teije, A. C. M. & van Harmelen, F. A. H., 2013, In : Lecture Notes in Computer Science. 7885, p. 38-47

Research output: Contribution to JournalArticleAcademicpeer-review

File

SemanticCT: A Semantically-Enabled System for Clinical Trials

Huang, Z., ten Teije, A. C. M. & van Harmelen, F. A. H., 2013, In : Lecture Notes in Computer Science. 8268, iss, p. 11-25

Research output: Contribution to JournalArticleAcademicpeer-review

File

Towards automatic patient eligibility assessment: from free-text criteria to queries

Milian, K. & ten Teije, A. C. M., 2013, 14th Conference on Artificial Intelligence in Medicine (AIME2013). Peek, N., Morales, M. & Peleg, M. (eds.). Springer, p. 78-83

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Ontology
Semantics
Pipelines
Data storage equipment