prof. dr. Bas Teusink

Search results

• 2024

  Understanding and computational design of genetic circuits of metabolic networks

  Berkvens, A., Salinas, L., Remeijer, M., Planqué, R., Teusink, B. & Bruggeman, F. J., Apr 2024, In: Essays in Biochemistry. 68, 1, p. 41-51 11 p.

  Research output: Contribution to Journal › Review article › Academic › peer-review

  Open Access

  • Metabolic Network 100%
  • Escherichia coli 100%
  • Gene Expression 100%
  • Transcription Factors 100%
  • Metabolic Pathway 50%
• 2023

  Trade-offs between the instantaneous growth rate and long-term fitness: Consequences for microbial physiology and predictive computational models

  Bruggeman, F. J., Teusink, B. & Steuer, R., Oct 2023, In: BioEssays. 45, 10, p. 1-20 20 p., 2300015.

  Research output: Contribution to Journal › Review article › Academic › peer-review

  Open Access

  • Microbial Physiology 100%
  • Microorganism 100%
  • Escherichia coli 100%
  • Stress 100%
  • Biological Sciences 50%
• 2022

  Use and limitations of genome-scale metabolic models in food microbiology

  Somerville, V., Grigaitis, P., Battjes, J., Moro, F. & Teusink, B., Feb 2022, In: Current Opinion in Food Science. 43, p. 225-231 7 p.

  Research output: Contribution to Journal › Review article › Academic › peer-review

  Open Access

  • Fermented Food 100%

• Kinetic Modeling of Saccharomyces cerevisiae Central Carbon Metabolism: Achievements, Limitations, and Opportunities

  Lao-Martil, D., Verhagen, K. J. A., Schmitz, J. P. J., Teusink, B., Wahl, S. A. & van Riel, N. A. W., Jan 2022, In: Metabolites. 12, 1, p. 1-23 23 p., 74.

  Research output: Contribution to Journal › Review article › Academic › peer-review

  Open Access

  • Industrial Fermentation 100%
  • Model Topology 100%
  • Energy Building 100%
• 2020

  Lifestyle, metabolism and environmental adaptation in Lactococcus lactis

  Kleerebezem, M., Bachmann, H., van Pelt-KleinJan, E., Douwenga, S., Smid, E. J., Teusink, B. & van Mastrigt, O., 24 Nov 2020, In: FEMS Microbiology Reviews. 44, 6, p. 804-820 17 p.

  Research output: Contribution to Journal › Review article › Academic › peer-review

  Open Access

  File

  • Metabolic Pathway 100%
  • Evolutionary Adaptation 100%
  • Lactic Acid Bacterium 100%
  • Lactococcus Lactis 100%
  • Lactic Acid 100%
  443 Downloads (Pure)

• SBML Level 3: an extensible format for the exchange and reuse of biological models

  Keating, S. M., Waltemath, D., König, M., Zhang, F., Dräger, A., Chaouiya, C., Bergmann, F. T., Finney, A., Gillespie, C. S., Helikar, T., Hoops, S., Malik-Sheriff, R. S., Moodie, S. L., Moraru, I. I., Myers, C. J., Naldi, A., Olivier, B. G., Sahle, S., Schaff, J. C. & Smith, L. P. & 121 others, Swat, M. J., Thieffry, D., Watanabe, L., Wilkinson, D. J., Blinov, M. L., Begley, K., Faeder, J. R., Gómez, H. F., Hamm, T. M., Inagaki, Y., Liebermeister, W., Lister, A. L., Lucio, D., Mjolsness, E., Proctor, C. J., Raman, K., Rodriguez, N., Shaffer, C. A., Shapiro, B. E., Stelling, J., Swainston, N., Tanimura, N., Wagner, J., Meier-Schellersheim, M., Sauro, H. M., Palsson, B., Bolouri, H., Kitano, H., Funahashi, A., Hermjakob, H., Doyle, J. C., Hucka, M., Adams, R. R., Allen, N. A., Angermann, B. R., Antoniotti, M., Bader, G. D., Červený, J., Courtot, M., Cox, C. D., Dalle Pezze, P., Demir, E., Denney, W. S., Dharuri, H., Dorier, J., Drasdo, D., Ebrahim, A., Eichner, J., Elf, J., Endler, L., Evelo, C. T., Flamm, C., Fleming, R. M. T., Fröhlich, M., Glont, M., Gonçalves, E., Golebiewski, M., Grabski, H., Gutteridge, A., Hachmeister, D., Harris, L. A., Heavner, B. D., Henkel, R., Hlavacek, W. S., Hu, B., Hyduke, D. R., de Jong, H., Juty, N., Karp, P. D., Karr, J. R., Kell, D. B., Keller, R., Kiselev, I., Klamt, S., Klipp, E., Knüpfer, C., Kolpakov, F., Krause, F., Kutmon, M., Laibe, C., Lawless, C., Li, L., Loew, L. M., Machne, R., Matsuoka, Y., Mendes, P., Mi, H., Mittag, F., Monteiro, P. T., Natarajan, K. N., Nielsen, P. M. F., Nguyen, T., Palmisano, A., Pettit, J. B., Pfau, T., Phair, R. D., Radivoyevitch, T., Rohwer, J. M., Ruebenacker, O. A., Saez-Rodriguez, J., Scharm, M., Schmidt, H., Schreiber, F., Schubert, M., Schulte, R., Sealfon, S. C., Smallbone, K., Soliman, S., Stefan, M. I., Sullivan, D. P., Takahashi, K., Teusink, B., Tolnay, D., Vazirabad, I., von Kamp, A., Wittig, U., Wrzodek, C., Wrzodek, F., Xenarios, I., Zhukova, A. & Zucker, J., 1 Aug 2020, In: Molecular Systems Biology. 16, 8, p. 1-21 21 p., e9110.

  Research output: Contribution to Journal › Review article › Academic › peer-review

  Open Access

  • Markup Language 100%
  • Data Source 20%
  • Modelers 20%
  • Integrating Data 20%
  • Logical Network 20%

• The common message of constraint-based optimization approaches: overflow metabolism is caused by two growth-limiting constraints

  de Groot, D. H., Lischke, J., Muolo, R., Planqué, R., Bruggeman, F. J. & Teusink, B., 1 Feb 2020, In: Cellular and Molecular Life Sciences. 77, 3, p. 441-453 13 p.

  Research output: Contribution to Journal › Review article › Academic › peer-review

  Open Access

  • Metabolism 100%
  • Saccharomyces cerevisiae 100%
  • Cancer Cell 100%
  • Escherichia coli 100%
  • Recurrent Selection 100%

• Microdroplet screening and selection for improved microbial production of extracellular compounds

  van Tatenhove-Pel, R. J., Hernandez-Valdes, J. A., Teusink, B., Kuipers, O. P., Fischlechner, M. & Bachmann, H., Feb 2020, In: Current Opinion in Biotechnology. 61, p. 72-81 10 p.

  Research output: Contribution to Journal › Review article › Academic › peer-review

  Open Access

  • Genotyping 100%
  • Microorganism 100%
  • Fermentation 100%
  • Cell Compartmentalization 100%