Research output per year
Research output per year
Personal profile
Research
I have a fascination for the basic principles of life, using methods from systems biology and biophysics. I mostly focus on unraveling basic mechanisms of microbial growth and regulation of metabolism and protein expression, using experimental, computational and theoretical methods. Our lab has expertise on experimental microbial physiology, genome-scale stoichiometric modelling, stochastic theory, differential equation and stochastic dynamic models, fluorescence microscopy of microbial growth and reporter protein expression and software development.
Teaching
Classes on experimental and theoretical systems biology and biophysics methods focussing on microorganisms and biochemical reaction networks.
Prizes and Awards
University Research Chair 2014-2019
NWO VIDI 2012 - 2017
Ancillary activities
No ancillary activities
Ancillary activities are updated daily
User created Keywords
- Systems Biology
- Biophysics
- Computational Biology
- Fluorescence Microscopy
- Microbial Physiology
- Microbiology
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Dive into the research topics where FJ Bruggeman is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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A yeast FRET biosensor enlightens cAMP signaling
Botman, D., O'Toole, T. G., Goedhart, J., Bruggeman, F. J., van Heerden, J. H. & Teusink, B., 15 Jun 2021, In: Molecular Biology of the Cell. 32, 13, p. 1229-1240 12 p.Research output: Contribution to Journal › Article › Academic › peer-review
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Unlocking Elementary Conversion Modes: ecmtool Unveils All Capabilities of Metabolic Networks
Clement, T. J., Baalhuis, E. B., Teusink, B., Bruggeman, F. J., Planqué, R. & de Groot, D. H., 8 Jan 2021, In: Patterns. 2, 1, 100177.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
Biphasic Cell-Size and Growth-Rate Homeostasis by Single Bacillus subtilis Cells
Nordholt, N., van Heerden, J. H. & Bruggeman, F. J., 22 Jun 2020, In: Current Biology. 30, 12, p. 2238-2247.e5 16 p.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
Elementary Growth Modes provide a molecular description of cellular self-fabrication
de Groot, D. H., Hulshof, J., Teusink, B., Bruggeman, F. J. & Planqué, R., 2020, In: PLoS Computational Biology. 16, 33 p., e1007559.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
Searching for principles of microbial physiology
Bruggeman, F. J., Planqué, R., Molenaar, D. & Teusink, B., 24 Nov 2020, In: FEMS Microbiology Reviews. 44, 6, p. 821-844 24 p.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access
Datasets
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Additional file 1: of Adaption to glucose limitation is modulated by the pleotropic regulator CcpA, independent of selection pressure strength
Price, C. (Contributor), Santos, F. B. D. (Contributor), Hesseling, A. (Contributor), Uusitalo, J. (Contributor), Bachmann, H. (Contributor), Ladislau Benavente, V. (Contributor), Goel, A. (Contributor), Berkhout, J. (Contributor), Bruggeman, F. (Contributor), Marrink, S. (Contributor), Montalban-Lopez, M. (Contributor), Jong, A. (Contributor), Kok, J. (Contributor), Molenaar, D. (Contributor), Poolman, B. (Contributor), Teusink, B. (Contributor) & Kuipers, O. (Contributor), Unknown Publisher, 1 Oct 2019
DOI: 10.6084/m9.figshare.7576595.v1, https://springernature.figshare.com/articles/Additional_file_1_of_Adaption_to_glucose_limitation_is_modulated_by_the_pleotropic_regulator_CcpA_independent_of_selection_pressure_strength/7576595/1
Dataset