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Ancillary activities

  • Elsevier | Amsterdam | Executive Editor Computational Biology and Chemistry | 2014-04-01 - present

Ancillary activities are updated daily

Fingerprint Fingerprint is based on mining the text of the person's scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

  • 7 Similar Profiles
Sequence Alignment Medicine & Life Sciences
Proteins Medicine & Life Sciences
Alignment Mathematics
Protein Mathematics
Computational Biology Medicine & Life Sciences
Genes Chemical Compounds
Multiple Sequence Alignment Mathematics
Protein-protein Interaction Mathematics

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 2003 2019

Addendum: The FAIR Guiding Principles for scientific data management and stewardship

Wilkinson, M. D., Dumontier, M., Jan Aalbersberg, I., Appleton, G., Axton, M., Baak, A., Blomberg, N., Boiten, J. W., da Silva Santos, L. B., Bourne, P. E., Bouwman, J., Brookes, A. J., Clark, T., Crosas, M., Dillo, I., Dumon, O., Edmunds, S., Evelo, C. T., Finkers, R., Gonzalez-Beltran, A. & 33 othersGray, A. J. G., Groth, P., Goble, C., Grethe, J. S., Heringa, J., Hoen, P. A. C. T., Hooft, R., Kuhn, T., Kok, R., Kok, J., Lusher, S. J., Martone, M. E., Mons, A., Packer, A. L., Persson, B., Rocca-Serra, P., Roos, M., van Schaik, R., Sansone, S. A., Schultes, E., Sengstag, T., Slater, T., Strawn, G., Swertz, M. A., Thompson, M., van der Lei, J., van Mulligen, E., Jan Velterop, V., Waagmeester, A., Wittenburg, P., Wolstencroft, K., Zhao, J. & Mons, B., 19 Mar 2019, In : Scientific Data. 6, p. 1-1 1 p., 6.

Research output: Contribution to JournalArticleAcademicpeer-review

Bioinformatics in the Netherlands: The value of a nationwide community

Van Gelder, C. W. G., Hooft, R. W. W., Van Rijswijk, M. N., Van Den Berg, L., Kok, R. G., Reinders, M., Mons, B. & Heringa, J., 22 Mar 2019, In : Briefings in bioinformatics. 20, 2, p. 375-383 9 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Bioinformatics
Computational Biology
Netherlands
Biological Science Disciplines
Research

Mining inter-relationships in online scientific articles and its visualization: Natural language processing for systems biology modeling

Melethadathil, N., Nair, B., Diwakar, S. & Heringa, J., Feb 2019, In : International Journal of Online Engineering. 15, 2, p. 39-59 21 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Visualization
Medicine
Labels
Processing
Oncology

Reasoning about cell dynamics using network models

Jacobsen, A., 2019, 182 p.

Research output: PhD ThesisPhD Thesis - Research VU, graduation VUAcademic

Open Access
File

SeRenDIP: SEquential REmasteriNg to DerIve Profiles for fast and accurate predictions of PPI interface positions

Hou, Q., De Geest, P., Griffioen, C. J., Abeln, S., Heringa, J. & Feenstra, K. A., 22 May 2019, In : Bioinformatics.

Research output: Contribution to JournalArticleAcademicpeer-review

Web Server
Proteins
Protein
Prediction
Interaction

Activities 2015 2017

  • 3 Lecture / Presentation

Seeing the Trees through the Forest: Sequence-based Homo- and Heteromeric Protein-protein Interaction sites prediction using Random Forest

K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker), Wim F. Vranken (Speaker)
5 Apr 2017

Activity: Lecture / PresentationAcademic

CLUB-MARTINI: Selecting Favorable Interactions amongst Available Candidates, a Coarse-Grained Simulation approach to Scoring Docking Decoys

K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker), Marc F Lensink (Speaker)
19 Apr 2016

Activity: Lecture / PresentationAcademic

CLUB-MARTINI: Selecting favorable interactions amongst available candidates: A coarse-grained simulation approach to scoring docking decoys.

K.A. Feenstra (Speaker), Jaap Heringa (Speaker), Q. Hou (Speaker), Marc F Lensink (Speaker)
8 Dec 2015

Activity: Lecture / PresentationAcademic