Research Output per year
Personal profile
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Sequence Alignment
Medicine & Life Sciences
Chromosome Breakage
Medicine & Life Sciences
Workflow
Medicine & Life Sciences
Molecular Dynamics Simulation
Medicine & Life Sciences
Proteins
Medicine & Life Sciences
Nucleotides
Medicine & Life Sciences
Nucleotide Motifs
Medicine & Life Sciences
Molecular dynamics
Engineering & Materials Science
Network
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Research Output 2015 2019
Tailor-made multiple sequence alignments using the PRALINE 2 alignment toolkit
Dijkstra, M. J. J., van der Ploeg, A. J., Feenstra, K. A., Fokkink, W. J., Abeln, S. & Heringa, J., 1 Aug 2019, In : Bioinformatics. p. 1-3 3 p.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access
Multiple Sequence Alignment
Workflow
Sequence Alignment
Work Flow
Alignment
Motif-Aware PRALINE: Improving the alignment of motif regions: Improving the alignment of motif regions
Dijkstra, M., Bawono, P., Abeln, S., Feenstra, K. A., Fokkink, W. & Heringa, J., 1 Nov 2018, In : PLoS Computational Biology. 14, 11, p. 1-19 19 p., e1006547.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access
Sequence Alignment
sequence alignment
Alignment
Multiple Sequence Alignment
Benchmarking
The characteristics of molten globule states and folding pathways strongly depend on the sequence of a protein
Dijkstra, M. J. J., Fokkink, W. J., Heringa, J., van Dijk, E. & Abeln, S., 17 Nov 2018, In : Molecular Physics. 116, 21-22, p. 3173-3180 8 p.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access
globules
folding
Molten materials
Hot Temperature
proteins
Detection of structural variants and recurrent breakpoint genes in colorectal adenoma-to-carcinoma progression
van den Broek, E., Dijkstra, M. J. J., Voorham, Q. J. M., Carvalho, B., van de Wiel, M. A., Abeln, S., Meijer, G. A. & Fijneman, R. J. A., Feb 2017, In : Cancer Research. 77Research output: Contribution to Journal › Article › Academic
Multiple sequence alignment
Bawono, P., Dijkstra, M., Pirovano, W., Feenstra, A., Abeln, S. & Heringa, J., 2017, Methods in Molecular Biology: Volume I: Data, Sequence Analysis, and Evolution. Humana Press Inc, Vol. 1525. p. 167-189 23 p. (Methods in Molecular Biology; vol. 1525).Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review
Sequence Alignment
Sequence Analysis
Proteins
Nucleotides
Research Personnel