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Research Output 2007 2019

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2019

Addendum: The FAIR Guiding Principles for scientific data management and stewardship

Wilkinson, M. D., Dumontier, M., Jan Aalbersberg, I., Appleton, G., Axton, M., Baak, A., Blomberg, N., Boiten, J. W., da Silva Santos, L. B., Bourne, P. E., Bouwman, J., Brookes, A. J., Clark, T., Crosas, M., Dillo, I., Dumon, O., Edmunds, S., Evelo, C. T., Finkers, R., Gonzalez-Beltran, A. & 33 othersGray, A. J. G., Groth, P., Goble, C., Grethe, J. S., Heringa, J., Hoen, P. A. C. T., Hooft, R., Kuhn, T., Kok, R., Kok, J., Lusher, S. J., Martone, M. E., Mons, A., Packer, A. L., Persson, B., Rocca-Serra, P., Roos, M., van Schaik, R., Sansone, S. A., Schultes, E., Sengstag, T., Slater, T., Strawn, G., Swertz, M. A., Thompson, M., van der Lei, J., van Mulligen, E., Jan Velterop, V., Waagmeester, A., Wittenburg, P., Wolstencroft, K., Zhao, J. & Mons, B., 19 Mar 2019, In : Scientific Data. 6, p. 1-1 1 p., 6.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access

Evaluating FAIR maturity through a scalable, automated, community-governed framework

Wilkinson, M. D., Dumontier, M., Sansone, S. A., Bonino da Silva Santos, L. O., Prieto, M., Batista, D., McQuilton, P., Kuhn, T., Rocca-Serra, P., Crosas, M. & Schultes, E., 20 Sep 2019, In : Scientific Data. 6, 1, p. 1-12 12 p., 174.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Acceptance tests
maturity
Resources
Application programs
resources
2017

Computational Controversy

Timmermans, B., Kuhn, T., Beelen, K. & Aroyo, L., 23 Jun 2017, In : Lecture Notes in Computer Science. 10540

Research output: Contribution to JournalArticleAcademicpeer-review

Social sciences
Social Sciences
Wikipedia
Vaccination
Climate Change

ControCurator: Understanding Controversy Using Collective Intelligence

Timmermans, B., Aroyo, L., Kuhn, T., Beelen, K., Kanoulas, E., van de Velde, B. & van Eerten, G., 2017, In : Collective Intelligence.

Research output: Contribution to JournalArticleAcademicpeer-review

Data Science--Methods, infrastructure, and applications

Dumontier, M. & Kuhn, T., 2017, In : Data Science. 1, 1-2

Research output: Contribution to JournalArticleAcademic

Extracting Core Claims from Scientific Articles

Jansen, T. & Kuhn, T., 24 Jul 2017, In : Postproceedings of the Benelux Conference on Artificial Intelligence (BNAIC) 2016. 2016, p. 32-46

Research output: Contribution to JournalArticleAcademicpeer-review

Communication
Compliance

Genuine semantic publishing

Kuhn, T. & Dumontier, M., 2017, In : Data Science. Preprint, p. 1-16 16 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Reliable Granular References to Changing Linked Data

Kuhn, T., Willighagen, E., Evelo, C. T., Queralt-Rosinach, N., Centeno, E. & Furlong, L. I., 30 Aug 2017, In : Proceedings of the 16th International Semantic Web Conference (ISWC) 2017. p. 436-451

Research output: Contribution to JournalArticleAcademicpeer-review

File
provenance
metadata
explosion
persistence
history

Understanding knowledge networks

Mangaladevi, K., Beek, W. & Kuhn, T., 2017, In : CEUR Workshop Proceedings. 1946, p. 38-49 12 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Electronic mail
Terminology
Ontology
Structural properties
Proteins
2016

Decentralized provenance-aware publishing with nanopublications

Kuhn, T., Chichester, C., Krauthammer, M., Queralt-Rosinach, N., Verborgh, R., Giannakopoulos, G., Ngonga Ngomo, A-C., Viglianti, R. & Dumontier, M., 22 Aug 2016, In : PeerJ Computer Science. 2, p. e78

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
provenance
researchers
Publications
Semantic Web
Semantics

Fully automatic multi-language translation with a catalogue of phrases – successful employment for the Swiss avalanche bulletin

Winkler, K. & Kuhn, T., 2016, In : Language Resources and Evaluation. 51, 1, p. 13-35

Research output: Contribution to JournalArticleAcademicpeer-review

File
bulletin
Swiss
language
French language
costs

Nanopub-Java: A Java library for nanopublications

Kuhn, T., 2016, In : CEUR Workshop Proceedings. 1572, p. 19-25 7 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Servers

Publishing DisGeNET as nanopublications

Queralt-Rosinach, N., Kuhn, T., Chichester, C., Dumontier, M., Sanz, F. & Furlong, L. I., 23 Jun 2016, In : Semantic Web. 7, 5, p. 519-528 10 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Semantics
Metadata
Data mining
Data structures
Genes

The FAIR Guiding Principles for scientific data management and stewardship

Wilkinson, M. D., Dumontier, M., Aalbersberg, IJ. J., Appleton, G., Axton, M., Baak, A., Blomberg, N., Boiten, J-W., da Silva Santos, L. B., Bourne, P. E., Bouwman, J., Brookes, A. J., Clark, T., Crosas, M., Dillo, I., Dumon, O., Edmunds, S., Evelo, C. T., Finkers, R., Gonzalez-Beltran, A. & 33 othersGray, A. J. G., Groth, P. T., Goble, C., Grethe, J. S., Heringa, J., ’t Hoen, P. A. C., Hooft, R., Kuhn, T., Kok, R., Kok, J., Lusher, S. J., Martone, M. E., Mons, A., Packer, A. L., Persson, B., Rocca-Serra, P., Roos, M., van Schaik, R., Sansone, S-A., Schultes, E., Sengstag, T., Slater, T., Strawn, G., Swertz, M. A., Thompson, M., van der Lei, J., van Mulligen, E., Velterop, J., Waagmeester, A., Wittenburg, P., Wolstencroft, K., Zhao, J. & Mons, B., 15 Mar 2016, In : Scientific Data. 3, 160018.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Reusability
Data Management
Information management
management
Reuse
2015

Collaborative multilingual knowledge management based on controlled natural language

Kaljurand, K., Kuhn, T. & Canedo, L., 2015, In : Semantic Web. 6, 3, p. 241-258 18 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Knowledge management
Ontology
Semantics
Knowledge representation
User interfaces

Making Digital Artifacts on the Web Verifiable and Reliable

Kuhn, T. & Dumontier, M., 7 Jul 2015, In : IEEE Transactions on Knowledge and Data Engineering.

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
File
Network protocols
2014

A Survey and Classification of Controlled Natural Languages

Kuhn, T., 2014, In : Computational Linguistics. 40, 1, p. 121-170 50 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Formal languages
Terminology
language
Communication
Language

Inheritance patterns in citation networks reveal scientific memes

Kuhn, T., Perc, M. & Helbing, D., 2014, In : Physical Review X. 4, 4, 041036.

Research output: Contribution to JournalArticleAcademicpeer-review

linguistics
genes
occurrences
filters
thresholds

Mining images in biomedical publications: Detection and analysis of gel diagrams

Kuhn, T., Nagy, M. L., Luong, T. B. & Krauthammer, M., 25 Apr 2014, In : Journal of Biomedical Semantics. 5, 1, p. 10

Research output: Contribution to JournalArticleAcademicpeer-review

Publications
Gels
Proteins
Workflow
Names

Verifiable source code documentation in controlled natural language

Kuhn, T. & Bergel, A., 15 Dec 2014, In : Science of Computer Programming. 96, P1, p. 121-140 20 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Formal languages
Engines
Defects
Experiments
2013

A Principled Approach to Grammars for Controlled Natural Languages and Predictive Editors

Kuhn, T., 2013, In : Journal of Logic, Language and Information. 22, 1, p. 33-70 38 p.

Research output: Contribution to JournalArticleAcademicpeer-review

grammar
editor
Formal logic
Knowledge representation
language

The understandability of OWL statements in controlled English

Kuhn, T., 2013, In : Semantic Web. 4, 1, p. 101-115 15 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Semantic Web
Experiments
2012

Coral: Corpus access in controlled language

Kuhn, T. & Höfler, S., Nov 2012, In : Corpora. 7, 2, p. 187-206 20 p.

Research output: Contribution to JournalArticleAcademicpeer-review

language
editor
functionality
experiment
Controlled

Finding and accessing diagrams in biomedical publications.

Kuhn, T., Luong, T. & Krauthammer, M., 2012, In : AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2012, p. 468-474 7 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Search Engine
Publications
Technology
Datasets

Underspecified scientific claims in nanopublications

Kuhn, T. & Krauthammer, M., 7 Sep 2012, In : CEUR Workshop Proceedings. 906, p. 29-32 4 p.

Research output: Contribution to JournalArticleAcademicpeer-review

2011

Codeco: A grammar notation for controlled natural language in predictive editors

Kuhn, T., 29 Mar 2011, In : CEUR Workshop Proceedings. 622

Research output: Contribution to JournalArticleAcademicpeer-review

2009

AceWiki: A natural and expressive semantic wiki

Kuhn, T., 2009, In : CEUR Workshop Proceedings. 543

Research output: Contribution to JournalArticleAcademicpeer-review

Semantics
Formal languages
Semantic Web

Controlled natural language for clinical practice guidelines?

Shiffman, R. N., Michel, G., Krauthammer, M., Fuchs, N. E., Kaljurand, K. & Kuhn, T., 1 Apr 2009, In : CEUR Workshop Proceedings. 448

Research output: Contribution to JournalArticleAcademicpeer-review

Pediatrics
Decision support systems
Engineers

How controlled english can improve semantic wikis

Kuhn, T., 7 Jul 2009, In : CEUR Workshop Proceedings. 464, p. 1-16 16 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Semantics

How to evaluate controlled natural languages

Kuhn, T., 1 Apr 2009, In : CEUR Workshop Proceedings. 448

Research output: Contribution to JournalArticleAcademicpeer-review

Experiments
2008

AceWiki: Collaborative ontology management in controlled natural language

Kuhn, T., 2008, In : CEUR Workshop Proceedings. 360, p. 94-99 6 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Ontology
Semantics

Combining semantic wikis and controlled natural language

Kuhn, T., 2008, In : CEUR Workshop Proceedings. 401

Research output: Contribution to JournalArticleAcademicpeer-review

Ontology
Semantics