Y.J.M. Bollen

dr. ir.

20042018
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Research Output 2004 2018

  • 12 Article
  • 3 PhD Thesis - Research VU, graduation VU
  • 2 Meeting Abstract
  • 1 Chapter
2018

Single-molecule imaging of Escherichia coli transmembrane proteins

Varadajan, A., Oswald, F. & Bollen, Y. J. M., 2018, Methods in Molecular Biology. Peterman, E. (ed.). Humana Press Inc, Vol. 1665. p. 135-144 10 p. (Methods in Molecular Biology; vol. 1665).

Research output: Chapter in Book / Report / Conference proceedingChapterAcademicpeer-review

Escherichia coli Proteins
Biological Phenomena
Cell Fusion
Gram-Negative Bacteria
Fluorescence Microscopy
2017

Imaging membrane-protein diffusion in living bacteria

Varadarajan, A., 2017, 189 p.

Research output: PhD ThesisPhD Thesis - Research VU, graduation VUAcademic

Open Access
File

Intracellular transport studied with dynamic single-molecule super-resolution microscopy

Oswald, F., 2017, 173 p.

Research output: PhD ThesisPhD Thesis - Research VU, graduation VUAcademic

Open Access
File
2016

MreB-Dependent Organization of the E-coli Cytoplasmic Membrane Controls Membrane Protein Diffusion

Oswald, F., Varadarajan, A., Lill, H., Peterman, E. J. G. & Bollen, Y. J. M., 2016, In : Biophysical Journal. 110, 5, p. 1139-1149

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
Prokaryotic Cells
Thymidine Monophosphate
Membrane Proteins
Cell Membrane
Escherichia coli
2015

Membrane-Protein Diffusion in E. coli: A Random Walk in a Heterogeneous Landscape

Varadarajan, A., Oswald, F., Bollen, Y. J. M. & Peterman, E. J. G., 2015, In : Biophysical Journal. 108, 2, p. 323A-323A

Research output: Contribution to JournalMeeting AbstractOther research output

2014

Fatal attraction in glycolysis: how Saccharomyces cerevisiae manages sudden transitions to high glucose.

van Heerden, J. H., Wortel, M. T., Bruggeman, F. J., Heijnen, J. J., Bollen, Y. J. M., Planque, R., Hulshof, J., O'Toole, T. G., Wahl, A. & Teusink, B., 2014, In : Microbial Cell. 1, 3, p. 103-106

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access

Imaging and quantification of trans-membrane protein diffusion in living bacteria.

Oswald, F., Bank, E., Bollen, Y. J. M. & Peterman, E. J. G., 2014, In : Physical Chemistry Chemical Physics - PCCP. 16, 25, p. 12625-12634

Research output: Contribution to JournalArticleAcademicpeer-review

Membrane Proteins
Bacteria
Fluorescence Microscopy
Thermal Diffusion
Cell Membrane

Lost in transition: start-up of glycolysis yields subpopulations of nongrowing cells.

van Heerden, J. H., Wortel, M. T., Bruggeman, F. J., Heijnen, J. J., Bollen, Y. J. M., Planque, R., Hulshof, J., O'Toole, T. G., Wahl, S. A. & Teusink, B., 2014, In : Science. 343, 6174, 1245114.

Research output: Contribution to JournalArticleAcademicpeer-review

Glycolysis
Substrate Cycling
Energy Metabolism
Hydrolysis
Adenosine Triphosphate
2012

Distant residues mediate picomolar binding affinity of a protein cofactor

Bollen, Y. J. M., Westphal, A. H., Lindhoud, S., van Berkel, W. J. & van Mierlo, C. P., 2012, In : Nature Communications. 3, p. 1010

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
File
Flavodoxin
Flavin Mononucleotide
affinity
Ligands
proteins

Mechanistic Insights into the Twin-Arginine Translocation Cycle of Escherichia Coli by an In Vivo Single-Molecule Approach

Oswald, F., Wildenberg, S. M. J. L., Yau, K. W., van Ulsen, J. P., Wuite, G. J. L., Bollen, Y. J. M. & Peterman, E. J. G., 2012, In : Biophysical Journal. 102, 3, p. 664A-664A

Research output: Contribution to JournalMeeting AbstractOther research output

Open Access
2011

Exploring events along the bacterial Twin arginine Transport pathway

Shanmugham, A., 2011, Amsterdam: VU Vrije Universiteit.

Research output: PhD ThesisPhD Thesis - Research VU, graduation VUAcademic

Open Access
File

How to Quantify Protein Diffusion in the Bacterial Membrane

Wildenberg, S. M. J. L., Bollen, Y. J. M. & Peterman, E. J. G., 2011, In : Biopolymers. 95, 5, p. 312-321 10 p.

Research output: Contribution to JournalArticleAcademicpeer-review

Proteins
Membranes
Bacteria
Probability distributions
Membrane Proteins
2009

Quantification of amyloid-beta 40 in cerebrospinal fluid

Verwey, N. A., Veerhuis, R., Twaalfhoven, H. A. M., Wouters, D., Hoozemans, J. J. M., Bollen, Y. J. M., Killestein, J., Bibl, M., Wiltfang, J., Hack, C. E., Scheltens, P. & Blankenstein, M. A., 2009, In : Journal of Immunological Methods. 348, 1-2, p. 57-66

Research output: Contribution to JournalArticleAcademicpeer-review

Amyloid
Cerebrospinal Fluid
Enzyme-Linked Immunosorbent Assay
Frontotemporal Lobar Degeneration
Frontotemporal Dementia
2006

Membrane binding of twin arginine preproteins as an early step in translocation.

Shanmugham, A., Wong Fong Sang, H. W., Bollen, Y. J. M. & Lill, H., 2006, In : Biochemistry. 45, p. 2243-2249

Research output: Contribution to JournalArticleAcademicpeer-review

Arginine
Protein Sorting Signals
Membranes
Phospholipids
Bacterial Proteins

The folding energy landscape of apoflavodoxin is rugged: Hydrogen exchange reveals nonproductive misfolded intermediates.

Bollen, Y. J. M., Kamphuis, M. B. & Van Mierlo, C. P. M., 2006, In : Proceedings of the National Academy of Sciences of the United States of America. 103, p. 4095-4100

Research output: Contribution to JournalArticleAcademicpeer-review

folding
hydrogen
protein
energy
deuterium
2005

Last in, first out: the role of cofactor binding the flavodoxin folding.

Bollen, Y. J. M., Nabuurs, S. M., Berkel, W. J. H. & van Mierlo, C. P. M., 2005, In : Journal of Biological Chemistry. 280, p. 7836-7844

Research output: Contribution to JournalArticleAcademicpeer-review

Open Access
File
Flavodoxin
Azotobacter vinelandii
Ligands
Flavin Mononucleotide
Protein Binding

Protein topology affects the appearance of intermediates during the folding of proteins with a flavodoxin-like fold.

Bollen, Y. J. M. & van Mierlo, C. P. M., 2005, In : Biophysical Chemistry. 114, p. 181-189

Research output: Contribution to JournalArticleAcademicpeer-review

Flavodoxin
Protein Folding
Topology
Proteins
Azotobacter vinelandii
2004

Formation of on- and off-pathway intermediates in the folding kinetics of azotobacter vinelandii apoflavodoxin.

Bollen, Y. J. M., Sanchez, I. E. & Van Mierlo, C. P. M., 2004, In : Biochemistry. 43, p. 10475-10489

Research output: Contribution to JournalArticleAcademicpeer-review

Azotobacter vinelandii
Kinetics
Molecules
Peptides
Fluorescence Polarization