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• Conference contribution

  Label-free live brain imaging with third-harmonic generation microscopy

  Witte, S., Negrean, A., Lodder, J. C., de Kock, C. P. J., Testa-Silva, G., Mansvelder, H. D. & Groot, M. L., 2011, CLEO/Europe and EQEC 2011 Conference Digest. Optical Society of America

  Research output: Chapter in Book / Report / Conference proceeding › Conference contribution › Academic

• Tensor regularized total variation for third harmonic generation brain images

  Zhang, Z., Groot, M. L. & de Munck, J. C., 1 Jan 2017, EMBEC and NBC 2017 - Joint Conference of the European Medical and Biological Engineering Conference EMBEC 2017 and the Nordic-Baltic Conference on Biomedical Engineering and Medical Physics, NBC 2017. Eskola, H., Vaisanen, O., Viik, J. & Hyttinen, J. (eds.). Springer - Verlag, Vol. 65. p. 129-132 4 p.

  Research output: Chapter in Book / Report / Conference proceeding › Conference contribution › Academic › peer-review

  • Harmonic generation
  • Tensors
  • Brain
  • Image denoising
  • Microscopic examination
• Chapter

  Label-Free Live Brain Imaging with Ultrafast Nonlinear Microscopy

  Witte, S. M., Negrean, A., Lodder, J. C., Testa-Silva, G., de Kock, C. P. J., Mansvelder, H. D. & Groot, M. L., 2010, Ultrafast Phenomena XVII: Proceedings of the 17th International Conference. Chergui, M. (ed.). New York: Oxford University press, p. 871-873 952 p.

  Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

• Photoactive Yellow Protein – Converting Light into a Metastable Structural Change: Biomolecules and Supramolecular Assemblies

  Groot, M. L. & Hellingwerf, K. J., Jan 2017, Ultrafast Dynamics at the Nanoscale. Haacke, S. (ed.). Pan Stanford Publishing, p. 217-166

  Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review
• Article

  Cofactors Involved in Light-Driven Charge Separation in Photosystem I Identified by Subpicosecond Infrared Spectroscopy

  Di Donato, M., Stahl, A. D., van Stokkum, I. H. M., van Grondelle, R. & Groot, M. L., 2011, In: Biochemistry. 50, 4, p. 480-490

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Solar Energy
  • Photosystem I Protein Complex
  • Chlorophyll
  • Dimers
  • Infrared spectroscopy

• Effectiveness of Autologous Fat Grafting in Adherent Scars: Results Obtained by a Comprehensive Scar Evaluation Protocol

  Jaspers, M. E. H., Brouwer, K. M., van Trier, A. J. M., Groot, M. L., Middelkoop, E. & van Zuijlen, P. P. M., Jan 2017, In: Plastic and Reconstructive Surgery. 139, 1, p. 212-219 8 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

• Enzyme activation and catalysis: characterisation of the vibrational modes of substrate and product in protochlorophyllide oxidoreductase

  Sytina, O., Alexandre, M. T., Heyes, D. J., Hunter, C. N., Robert, B., van Grondelle, R. & Groot, M. L., 2011, In: Physical Chemistry Chemical Physics - PCCP. 13, 6, p. 2307 6 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Protochlorophyllide
  • Catalysis
  • Photons
  • Oxidoreductases
  • Chemical activation

• Extracting morphologies from third harmonic generation images of structurally normal human brain tissue

  Zhang, Z., Kuzmin, N. V., Groot, M. L. & de Munck, J. C., 1 Jun 2017, In: Bioinformatics. 33, 11, p. 1712-1720 9 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

• Identification of excited-state energy transfer and relaxation pathways in the peridinin-chlorophyll complex: an ultrafast mid-infrared study

  Bonetti, C., Alexandre, M. T. A., van Stokkum, I. H. M., Hiller, R., van Grondelle, R., Groot, M. L. & Kennis, J. T. M., 2010, In: Physical Chemistry Chemical Physics - PCCP. 12, p. 9256-9266

  Research output: Contribution to Journal › Article › Academic › peer-review

  • peridinin
  • Excited states
  • Chlorophyll
  • Energy transfer
  • Chlorophyll Binding Proteins

• Label-free live brain imaging and targeted patching with third-harmonic generation microscopy

  Witte, S., Negrean, A., Lodder, J. C., de Kock, C. P. J., Testa-Silva, G., Mansvelder, H. D. & Groot, M. L., 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 15, p. 5970-5975

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Harmonic generation
  • Microscopic examination
  • Labels
  • Brain
  • Imaging techniques

• Modeling of Multi-Exciton Transient Absorption Spectra of Protochlorophyllide Aggregates in Aqueous Solution

  Sytina, O., Novoderezhkin, V. I., van Grondelle, R. & Groot, M. L., 2011, In: Journal of Physical Chemistry A. 115, 43, p. 11944-11951

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Protochlorophyllide
  • Excitons
  • Absorption spectra
  • Charge transfer
  • aqueous solutions

• On the involvement of Single-Bond Rotation in the Primary Photochemistry of Photoactive Yellow Protein

  Stahl, A. D., Hospes, M., Singhal, K., van Stokkum, I. H. M., van Grondelle, R., Groot, M. L. & Hellingwerf, K. J., 2011, In: Biophysical Journal. 101, 5, p. 1184-1192

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  File

  • Photochemistry
  • single bond
  • Proteins
  179 Downloads (Pure)

• Primary reactions of bacteriophytochrome observed with ultrafast mid-infrared spectroscopy

  Toh, K. C., Stojkovic, E. A., Rupenyan, A. B., van Stokkum, I. H. M., Salumbides, M., Groot, M. L., Moffat, K. & Kennis, J. T. M., 2011, In: Journal of Physical Chemistry A. 115, 16, p. 3778-3786 9 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Phytochrome
  • phytochrome
  • Infrared spectroscopy
  • infrared spectroscopy
  • Isomerization

• Proline 68 Enhances Photoisomerization Yield in Photoactive Yellow Protein

  Rupenyan, A. B., Vreede, J., van Stokkum, I. H. M., Hospes, M., Kennis, J. T. M., Hellingwerf, K. J. & Groot, M. L., 2011, In: Journal of Physical Chemistry B. 115, 20, p. 6668-6677 10 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Photoisomerization
  • Chromophores
  • Proline
  • Proteins
  • chromophores

• Protochlorophyllide excited-state dynamics in organic solvents studied by time-resolved visible and mid-infrared spectroscopy

  Sytina, O. A., van Stokkum, I. H. M., Heyes, D. J., Hunter, C. N., van Grondelle, R. & Groot, M. L., 2010, In: Journal of Physical Chemistry B. 114, p. 4335-4344

  Research output: Contribution to Journal › Article › Academic › peer-review

• Proton transfer events in GFP

  Di Donato, M., van Wilderen, L. J. G. W., van Stokkum, I. H. M., Cohen Stuart, T. A., Kennis, J. T. M., Hellingwerf, K. J., van Grondelle, R. & Groot, M. L., 2011, In: Physical Chemistry Chemical Physics - PCCP. 13, 36, p. 16295-16305

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Proton transfer
  • Green Fluorescent Proteins
  • Protons
  • Chromophores
  • Light absorption

• Single and multi-exciton dynamics in aqueous protochlorophyllide aggregates

  Sytina, O., van Stokkum, I. H. M., van Grondelle, R. & Groot, M. L., 2011, In: Journal of Physical Chemistry A. 115, 16, p. 3936-3946 11 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Protochlorophyllide
  • Excitons
  • excitons
  • Chlorophyllides
  • enzymes