Find Research Outputs

Search results

• 2011

  Modeling of Multi-Exciton Transient Absorption Spectra of Protochlorophyllide Aggregates in Aqueous Solution

  Sytina, O., Novoderezhkin, V. I., van Grondelle, R. & Groot, M. L., 2011, In : Journal of Physical Chemistry A. 115, 43, p. 11944-11951

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Protochlorophyllide
  • Excitons
  • Absorption spectra
  • Charge transfer
  • aqueous solutions

• Modeling parameters of a load-sharing system through link functions in sequential order statistics models and associated inference

  Balakrishnan, N., Beutner, E. & Kamps, U., 1 Sep 2011, In : IEEE Transactions on Reliability. 60, 3, p. 605-611 7 p., 5954150.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Statistics
  • Maximum likelihood
  • Experiments

• Modeling science: studying the structure and dynamics of science

  Borner, K., Scharnhorst, A., Glanzel, W. & van den Besselaar, P. A. A., 2011, In : Scientometrics. 89, 1, special issue, p. 347-348 2 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  File
  139 Downloads (Pure)

• Modeling Situation Awareness in Human-Like Agents using Mental Models

  Hoogendoorn, M., van Lambalgen, R. M. & Treur, J., 2011, Proceedings of the Twenty-Second International Joint Conference on Artificial Intelligence, IJCAI'11. Walsh, T. (ed.). p. 1697-1704

  Research output: Chapter in Book / Report / Conference proceeding › Conference contribution › Academic › peer-review

  • Experiments

• Modeling structural changes in the volatility process

  Frijns, B., Lehnert, T. & Zwinkels, R. C. J., Jun 2011, In : Journal of Empirical Finance. 18, 3, p. 522-532 11 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Structural Change
  • Modeling
  • GARCH Model
  • GARCH
  • Benchmark

• Modeling the cost-effectiveness of health care systems for Alcohol Use Disorders: how implementation of eHealth interventions improves cost-effectiveness

  Smit, H. F. E., Lokkerbol, J., Riper, H., Majo, M. C., Boon, B. & Blankers, M., 2011, In : Journal of Medical Internet Research. 13, 3

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  • Telemedicine
  • Alcoholism
  • Cost-Benefit Analysis
  • Delivery of Health Care
  • Alcohols

• Modeling the long term health outcomes and cost-effectiveness of two interventions promoting fruit and vegetable intake among schoolchildren

  te Velde, S. J., Veerman, J. L., Tak, N. I., Bosmans, J. E., Klepp, K. I. & Brug, J., 2011, In : Economics and Human Biology. 9, 1, p. 14-22

  Research output: Contribution to Journal › Article › Academic › peer-review

• Modeling the sensitivity of sediment and water runoff dynamics to Holocene climate and land use changes at the catchment scale

  Notebaert, B., Verstraeten, G., Ward, P. J., Renssen, H. & Van Rompaey, A., 2011, In : Geomorphology. 126, 1-2, p. 18-31

  Research output: Contribution to Journal › Article › Academic › peer-review

  • land use change
  • soil erosion
  • Holocene
  • catchment
  • runoff

• Modelling approaches in systems biology, including Silicon Cell models.

  Kolodkin, A. N., Boogerd, F. C., Bruggeman, F. J. & Westerhoff, H. V., 2011, Systems Biology and Livestock Science. te Pas, M. F. W., Woelders, H. & Bannink, A. (eds.). Wiley-Blackwell, p. 31-51

  Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

• Modelling basin-wide variations in Amazon forest productivity - Part 1: Model calibration, evaluation and upscaling functions for canopy photosynthesis

  Mercado, L. M., Lloyd, J., Dolman, A. J., Sitch, S. & Patino, S., 2011, In : Biogeosciences. 8, 1, p. 653-656

  Research output: Contribution to Journal › Erratum › Academic

  Open Access

  File
  167 Downloads (Pure)

• Modelling early stage Parkinson's disease in mice and marmosets

  Verhave, P. S., 2011

  Research output: PhD Thesis › PhD Thesis - Research external, graduation VU

  Open Access

  File
  45 Downloads (Pure)

• Modelling feeding processes in bivalves in mechanistic aproach.

  Saraiva, S., van der Meer, J., Kooijman, S. A. L. M. & Sousa, T., 2011, In : Ecological Modelling. 222, p. 514-523

  Research output: Contribution to Journal › Article › Academic › peer-review

  • bivalve
  • energy budget
  • modeling
  • food
  • assimilation efficiency

• Modelling governance and institutions for global sustainability politics (ModelGIGS). Theoretical foundations and conceptual framework

  Dellas, E. D., Pattberg, P. H., Kok, M., Frantzi, S., de Vos, M., Janssen, P., Biermann, F. & Petersen, A. C., 2011, Amsterdam and Bilthoven: IVM Institute for Environmental Studies and PBL Netherlands Environmental Assessment Agency. 112 p. (IVM-report (W-11/05))

  Research output: Book / Report › Report › Academic

  Open Access

  File
  34 Downloads (Pure)

• Modelling Joint Decision Making Processes Involving Emotion-Related Valuing and Mutual Empathic Understanding

  Treur, J., 2011, In : Lecture Notes in Computer Science. 7047, p. 410-423

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  File

  • Joint Modeling
  • Emotion
  • Decision Making
  • Decision making
  • Mirrors
  84 Downloads (Pure)

• Modelling of land cover and agricultural change in Europe: Combining the CLUE and CAPRI-Spat approaches

  Britz, W., Verburg, P. H. & Leip, A., 2011, In : Agriculture, Ecosystems and Environment. 142, p. 40-50

  Research output: Contribution to Journal › Article › Academic › peer-review

  • agricultural change
  • land cover
  • spit
  • land use
  • Europe

• Modelling the active hearing process in mosquitoes

  Avitabile, D., Homer, M., Jackson, J., Robert, D. & Champneys, A., 12 Dec 2011, What Fire is in Mine Ears: Progress in Auditory Biomechanics - Proceedings of the 11th International Mechanics of Hearing Workshop. p. 447-452 6 p. (AIP Conference Proceedings; vol. 1403).

  Research output: Chapter in Book / Report / Conference proceeding › Conference contribution › Academic › peer-review

  • hearing
  • threads
  • twitching
  • oscillators
  • homogenizing

• Modelling the Metaverse: A Theoretical Model of Effective Team Collaboration in 3D Virtual Environments

  van der Land, S. F., Schouten, A. P., van den Hooff, B. J. & Feldberg, J. F. M., 2011, In : Journal of Virtual Worlds Research. 4, 3, p. 1-18

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  File
  28 Downloads (Pure)

• Modelling Trust Dynamics from a Neurological Perspective

  Hoogendoorn, M., Jaffry, S. W. & Treur, J., 2011, Advances in Cognitive Neurodynamics II. Wang, R. & Gu, F. (eds.). Springer Verlag, p. 523-536

  Research output: Chapter in Book / Report / Conference proceeding › Conference contribution › Academic › peer-review

• Modelling Trust for Communicating Agents: Agent-Based and Population-Based Perspectives

  Jaffry, S. W. & Treur, J., 2011, Proceedings of the Third International Conference on Computational Collective Intelligence. Jedrzejowicz, P., Nguyen, N.T. & Hoang, K. (eds.). Springer Verlag, p. 366-377

  Research output: Chapter in Book / Report / Conference proceeding › Conference contribution › Academic › peer-review

• Models for engineering applications

  Fiala, D., Havenith, G., Brode, P., Daanen, H. A. M., Cropper, P. C. & Cook, M. J., 2011, p. 38.

  Research output: Contribution to Conference › Abstract › Other research output

• Modern fundamentalisme: de mythe en de werkelijkheid

  van Saane, J. W., 2011, De fundi-factor van Nederland. Op zoek naar hedendaags fundamentalisme. Wieseman, P. (ed.). Zoetermeer: Meinema, p. 91-106

  Research output: Chapter in Book / Report / Conference proceeding › Conference contribution › Professional

• Modernity and cultural citizenship in the Netherlands Indies: An illustrated hypothesis

  Schulte Nordholt, H. G. C., 2011, In : Journal of Southeast Asian Studies. 42, p. 435-457

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Netherlands Indies
  • Cultural Citizenship
  • citizenship
  • modernity
  • nationalism

• Modern jongerenwerk als effectief instrument

  Veenbaas, R. & Noorda, J., 2011, In : Jeugdbeleid. 5, 4, p. 204-210 7 p.

  Research output: Contribution to Journal › Article › Professional

• Modes of Participation

  van Sliedregt, E., 2011, Forging a Convention for Crimes Against Humanity. Sadat, L. N. (ed.). Cambridge: Cambridge University Press, p. 223-261 592 p.

  Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic

• Modular kinetic analysis

  Krab, K., 2011, Methods in Enzymology. Jameson, D., Verma, M. & Westerhoff, H. V. (eds.). Burlington: Academic Press, p. 555-570 (Methods in Systems Biology; no. 500).

  Research output: Chapter in Book / Report / Conference proceeding › Chapter › Academic › peer-review

• Modulation of cardiovascular risk factors and inflammation in rheumatic diseases

  van Eijk, I. C., 2011

  Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU

  Open Access

  File
  125 Downloads (Pure)

• Modulation of Vascular Remodeling, a role for the immune system, growth factors and transcriptional regulation

  Seghers, L., 2011

  Research output: PhD Thesis › PhD Thesis - Research external, graduation external

• Moedig uit onmacht: Techniek van de onmacht; fatalisme in politiek en technologie: Oratie dr. M.J.G. van Eeten (boekbespreking)

  Boutellier, J. C. J., 2011, In : Tijdschrift voor Toezicht. 2, 1, p. 80-82

  Research output: Contribution to Journal › Article › Academic

  Open Access

  File
  30 Downloads (Pure)

• Moeilijk werken. Gezondheid en de arbeidsdeelname van migrantenvrouwen

  Keuzenkamp, S. & Keizer, M., 2011, Den Haag: Sociaal en Cultureel Planbureau. 117 p.

  Research output: Book / Report › Book › Academic

• Mogelijkheden voor preventie van AWBZ-gebruik: Netwerken van zelfstandig wonende ouderen

  Plaisier, I., van Tilburg, T. G. & Deeg, D. J. H., 2011, Amsterdam: Vrije Universiteit. 32 p.

  Research output: Book / Report › Report › Professional

  Open Access

  File
  63 Downloads (Pure)

• Mogen christenen de evolutieleer aanvaarden? [Bespreking van: D. Batten, J. Sarfati (2009) Is Genesis geschiedenis? 15 argumenten]

  de Vries, P., 2011, In : Kerkblad. 7, 12, p. 140-142

  Research output: Contribution to Journal › Book/Film/Article review › Professional

• Molecular Adaptation of Photoprotection: Triplet States in Light-Harvesting Proteins

  Gall, A., Berera, R., Alexandre, M. T. A., Pascal, A. A., Bordes, L., Mendes-Pinto, M. M., Andrianambinintsoa, S., Stoitchkova, K. V., Marin, A., Valkunas, L., Horton, P., Kennis, J. T. M., van Grondelle, R., Ruban, A. & Robert, B., 2011, In : Biophysical Journal. 101, 4, p. 934-942

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  File

  • Carotenoids
  • Chlorophyll
  • Light
  • Proteobacteria
  • Proteins
  154 Downloads (Pure)

• Molecular analysis of the inflorescence architecture in Petunia hybrida

  Roobeek, I., 2011, 160 p.

  Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU

  Open Access

  File
  203 Downloads (Pure)

• Molecular and cellular neuroplasticity in animal models of depression

  van Bokhoven, P., 2011, 147 p.

  Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU

  Open Access

  File
  206 Downloads (Pure)

• Molecular determinants of agonist-induced signalling of the sphingosine-1-phosphate type 1 (S1P1) receptor.

  de Graaf, C., van Loenen, P. B., Verzijl, D., Leurs, R., Rognan, D., Peters, S. L. M. & Alewijnse, A. E., 2011, In : European Journal of Pharmacology.

  Research output: Contribution to Journal › Article › Academic › peer-review

• Molecular determinants of ligand binding modes in the histamine H4 receptor: Linking ligand-based 3D-QSAR models to in silico guided receptor mutagenesis studies

  Istyastono, E. P., Nijmeijer, S., Lim, H. D., van de Stolpe, A., Roumen, L., Kooistra, A. J., Vischer, H. F., de Esch, I. J. P., Leurs, R. & de Graaf, C., 2011, In : Journal of Medicinal Chemistry. 54, p. 8136-8147 11 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Histamine H4 Receptors
  • Quantitative Structure-Activity Relationship
  • Mutagenesis
  • Histamine
  • Computer Simulation

• Molecular determinants of selective agonist and antagonist binding to the histamine H4 receptor

  Istyastono, E. P., de Graaf, C., De Esch, I. J. & Leurs, R., 2011, In : Current Topics in Medicinal Chemistry. 11, p. 661

  Research output: Contribution to Journal › Article › Academic › peer-review

• Molecular determinants of selective agonist and antagonist binding to the histamine H₄ receptor

  Istyastono, E. P., de Graaf, C., de Esch, I. J. P. & Leurs, R., 2011, In : Current Topics in Medicinal Chemistry. 11, 6, p. 661-79 19 p.

  Research output: Contribution to Journal › Review article › Academic › peer-review

  • Histamine Receptors
  • Ligands
  • Structure-Activity Relationship
  • Histamine
  • Computer Simulation

• Molecular diagnosis of oral premalignant disorders

  Bremmer, J. F., 2011, 102 p.

  Research output: PhD Thesis › PhD Thesis - Research VU, graduation VU

  Open Access

  File
  27 Downloads (Pure)

• Molecular diversity and distribution of aromatic hydrocarbon-degrading anaerobes across a landfill leachate plume.

  Staats, M., Braster, M. & Roling, W. F. M., 2011, In : Environmental Microbiology. 13, p. 1216-1227

  Research output: Contribution to Journal › Article › Academic › peer-review

  • benzylsuccinate synthase
  • Chemical Water Pollutants
  • landfill leachates
  • Aromatic Hydrocarbons
  • aromatic hydrocarbons

• Molecular dynamics simulations and free energy calculations on the enzyme 4-hydroxyphenylpyruvate dioxygenase

  de Beer, S. B. A., Glättli, A., Hutzler, J., Vermeulen, N. P. E. & Oostenbrink, B. C., 2011, In : Journal of Computational Chemistry.

  Research output: Contribution to Journal › Article › Academic › peer-review

• Molecular genetics and economics

  Beauchamp, J. P., Cesarini, D., Johannesson, M., Van Der Loos, M. H. M., Koellinger, P. D., Patrick, J. F. G., Fowler, J. H., Rosenquist, J. N., Thurik, A. R. & Christakis, N. A., 1 Sep 2011, In : Journal of Economic Perspectives. 25, 4, p. 57-82 26 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

• Molecular markers and HPV detection in the diagnosis of lower genital tract lesions

  Pirog, E. C., 2011

  Research output: PhD Thesis › PhD Thesis - Research external, graduation VU

  Open Access

  File
  286 Downloads (Pure)

• Molecular mechanisms of MLC1 and GLIALCAM mutations in megalencephalic leukoencephalopathy with subcortical cysts

  López-Hernández, T., Sirisi, S., Capdevila-Nortes, X., Montolio, M., Fernandez-Duenas, V., Scheper, G. C., van der Knaap, M. S., Casquero, P., Ciruela, F., Ferrer, I., Nunes, V. & Estevez, R., 2011, In : Human Molecular Genetics. 20, 16, p. 3266-3277

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Megalencephalic leukoencephalopathy with subcortical cysts
  • Mutation
  • Tars
  • Intercellular Junctions
  • Missense Mutation

• Molecular motors stiffen non-affine semiflexible polymer networks

  Broedersz, C. P. & MacKintosh, F. C., 2011, In : Soft Matter. 7, 7, p. 3186-3191

  Research output: Contribution to Journal › Article › Academic › peer-review

  • Polymers
  • polymers
  • filaments
  • stiffening
  • Mechanics

• Mon atelier est où je me trouve (au travail): Daniel Buren

  Davidts, W. J., 2011, L'artiste au travail. Tourcoing: ERSEP (L’Ecole Supérieure d'Art de Tourcoing), p. 10-24 40 p.

  Research output: Chapter in Book / Report / Conference proceeding › Chapter › Professional

• Monetary values of freight transport quality attributes: A sample of Tanzanian firms

  Zamparini, L., Layaa, J. & Dullaert, W., Nov 2011, In : Journal of Transport Geography. 19, 6, p. 1222-1234 13 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  • freight transport
  • firm
  • attribute
  • Travel time
  • Logistics

• Monitoring Policy and Research Activities on Science in Society in Europe (MASIS). National report: the Netherlands

  van den Besselaar, P. A. A., 2011, Lyngby, Denmark: COWI. 35 p.

  Research output: Book / Report › Report › Professional

• Monitoring Social Entrepreneurship in Dutch Primary and Secondary Education

  Minderman, G. D., Bossert, J. & Stieger, M., 2011, Public Leadership and Citizen Value. The Winelandspapers 2010. Bjorkman, J. W., van Eijbergen, E., Minderman, G. D. & Bekke, A. J. G. M. (eds.). The Hague: Eleven International Publishing, p. 151-166

  Research output: Chapter in Book / Report / Conference proceeding › Chapter › Professional

• Monitoring symptoms at home: What methods would cancer patients be comfortable using?

  Kleiboer, A. M., Gowing, K., Holm Hansen, C., Hibberd, C., Hodges, L., Walker, J., Thekkumpurath, P., O'Connor, M., Murray, G. & Sharpe, M., 2011, In : Quality of Life Research. 19, p. 965-968 4 p.

  Research output: Contribution to Journal › Article › Academic › peer-review

  Open Access

  File
  145 Downloads (Pure)