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2018
A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways
Atashgahi, S., Hornung, B., Van Der Waals, M. J., Da Rocha, U. N., Hugenholtz, F., Nijsse, B., Molenaar, D., Van Spanning, R., Stams, A. J. M., Gerritse, J. & Smidt, H., 14 Mar 2018, In : Scientific Reports. 8, 1, p. 1-12 12 p., 4490.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
Constraint-based models of microbial physiology: Surprisingly versatile
Teusink, B., Planqué, B., Molenaar, D. & Bruggeman, F., 1 Jan 2018, 10th International Conference on Simulation and Modelling in the Food and Bio-Industry 2018, FOODSIM 2018. Eurosis, p. 5-10 6 p.Research output: Chapter in Book / Report / Conference proceeding › Conference contribution › Academic › peer-review
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Naturally fermented milk from northern Senegal: Bacterial community composition and probiotic enrichment with Lactobacillus rhamnosus
Parker, M., Zobrist, S., Donahue, C., Edick, C., Mansen, K., Nadjari, M. H. Z., Heerikhuisen, M., Sybesma, W., Molenaar, D., Diallo, A. M., Milani, P. & Kort, R., 21 Sep 2018, In : Frontiers in Microbiology. 9, September, p. 1-12 12 p., 2218.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
Training for translation between disciplines: A philosophy for life and data sciences curricula
Anton Feenstra, K., Abeln, S., Westerhuis, J. A., Brancos Dos Santos, F., Molenaar, D., Teusink, B., Hoefsloot, H. C. J. & Heringa, J., 1 Jul 2018, In : Bioinformatics. 34, 13, p. i4-i12 9 p.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
2017
Experimental evolution and the adjustment of metabolic strategies in lactic acid bacteria
Bachmann, H., Molenaar, D., Branco dos Santos, F. & Teusink, B., 1 Aug 2017, In : FEMS Microbiology Reviews. 41, Supp_1, p. S201-S219Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
Systems biology of lactic acid bacteria: For food and thought
Teusink, B. & Molenaar, D., 1 Dec 2017, In : Current Opinion in Systems Biology. 6, p. 7-13 7 p.Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
2011
AmtB-mediated NH3 transport in prokaryotes must be active and as a consequence regulation of transport by GlnK is mandatory to limit futile cycling of NH4+/NH3
Boogerd, F. C., Ma, H., Bruggeman, F. J., van Heeswijk, W. C., Garcia-Contreras, R., Molenaar, D., Krab, K. & Westerhoff, H. V., 3 Jan 2011, In : FEBS Letters. 585, 1, p. 23-28Research output: Contribution to Journal › Article › Academic › peer-review
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Explorin metabolic pathway reconstruction and genome-wide expression profiling in lactobacillus reuteri to define functional probiotic features.
Saulnier, D. M. A., Santos, F., Roos, S., Mistretta, T-A., Spinler, J. K., Molenaar, D., Teusink, B. & Versalovic, J., 2011, In : PLoS ONE. 6, p. e18783Research output: Contribution to Journal › Article › Academic › peer-review
Open AccessFile94 Downloads (Pure) -
Functional analysis of the role of CggR (central glycolytic gene regulator) in Lactobacillus plantarum by transcriptome analysis
Rud, I., Naterstad, K., Bongers, R. S., Molenaar, D., Kleerebezem, M. & Axelsson, L., 2011, In : Microbial Biotechnology. 4, p. 345-356Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
Functional Identification in Lactobacillus reuteri of a PocR-like transcription factor regulating glycerol utilization and vitamin B12 synthesis.
Santos, F., Spinler, J. K., Saulnier, D. M. A., Molenaar, D., Teusink, B., de Vos, D. L., Versalovic, J. & Hugenholtz, J., 2011, In : Microbial Cell Factories. 10, p. 55Research output: Contribution to Journal › Article › Academic › peer-review
Open AccessFile146 Downloads (Pure) -
Genome-scale diversity and niche adaptation analysis of Lactococcus lactis by comparative genome hybridization using multi-strain arrays.
Siezen, R. J., Bayjanov, J. R., Felis, G. E., van der Sijde, M. R., Starrenburg, M., Molenaar, D., Wels, M., Hijum, S. A. & van Hylckama Vlieg, J. E. T., 2011, In : Microbial Biotechnology. 4, p. 383-402Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
High local substrate availability stabilizes a cooperative trait.
Bachmann, H., Molenaar, D., Kleerebezem, M. & van Hylckama Vlieg, J. E. T., 2011, In : ISME Journal. 5, p. 929-932Research output: Contribution to Journal › Article › Academic › peer-review
Open Access -
Identification of lactobacillus plantarum genes modulating, the cytokine response of human peripheral blood mononuclear cells.
van Hemert, S., Meijerink, M., Molenaar, D., Bron, P. A., de Vos, D. L., Kleerebezem, M., Wells, J. M. & Marco, M. L., 2011, In : BMC Microbiology. 10, p. 293Research output: Contribution to Journal › Article › Academic › peer-review
Open AccessFile130 Downloads (Pure) -
Systems Biology of lactic acid bacteria: a critical review.
Teusink, B., Bachmann, H. & Molenaar, D., 2011, In : Microbial Cell Factories. 10, A11, 17 p.Research output: Contribution to Journal › Article › Academic › peer-review
Open AccessFile184 Downloads (Pure) -
Volatile compound fingerprinting of mixed-culture fermentations.
de Bok, F. A. M., Janssen, P. W. M., Bayjanov, J. R., Sieuwerts, S., Lommen, A., van Hylckama Vlieg, J. E. T. & Molenaar, D., 2011, In : Applied and Environmental Microbiology. 77, p. 6233-6239Research output: Contribution to Journal › Article › Academic › peer-review
Open AccessFile150 Downloads (Pure)