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  • 2019
  • 2018
  • 2017
  • 2016

Author

  • Vinod Subramaniam
2019

Integrated polymer micro-ball lenses for two-dimensional divergence reduction of light from single-mode optical waveguides

Chang, L., Dijkstra, M., De Ridder, R. M., Wörhoff, K., Subramaniam, V. & Kanger, J. S., 1 Jan 2019, Proceedings 2015 European Conference on Lasers and Electro-Optics - European Quantum Electronics Conference, CLEO/Europe-EQEC 2015. Optical Society of America (OSA), (Proceedings 2015 European Conference on Lasers and Electro-Optics - European Quantum Electronics Conference, CLEO/Europe-EQEC 2015).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

Lipid-Conjugated Rigidochromic Probe Discloses Membrane Alteration in Model Cells of Krabbe Disease

Abbandonato, G., Storti, B., Tonazzini, I., Stöckl, M., Subramaniam, V., Montis, C., Nifosì, R., Cecchini, M., Signore, G. & Bizzarri, R., 5 Feb 2019, In : Biophysical Journal. 116, 3, p. 477-486 10 p.

Research output: Contribution to JournalArticle

Open Access
File

Nanophotonic measurement of the dark fraction in red fluorescent proteins

Prangsma, J. C., Molenaar, R., Subramaniam, V. & Blum, C., 1 Jan 2019, Proceedings 2015 European Conference on Lasers and Electro-Optics - European Quantum Electronics Conference, CLEO/Europe-EQEC 2015. Optical Society of America (OSA), (Proceedings 2015 European Conference on Lasers and Electro-Optics - European Quantum Electronics Conference, CLEO/Europe-EQEC 2015).

Research output: Chapter in Book / Report / Conference proceedingConference contributionAcademicpeer-review

2018

Exogenous α-synuclein hinders synaptic communication in cultured cortical primary rat neurons

Hassink, G. C., Raiss, C. C., Segers-Nolten, I. M. J., Van Wezel, R. J. A., Subramaniam, V., Le Feber, J. & Claessens, M. M. A. E., 1 Mar 2018, In : PLoS ONE. 13, 3, e0193763.

Research output: Contribution to JournalArticle

Open Access

Hydrophobic-Interaction-Induced Stiffening of α -Synuclein Fibril Networks

Semerdzhiev, S. A., Lindhoud, S., Stefanovic, A., Subramaniam, V., Van Der Schoot, P. & Claessens, M. M. A. E., 17 May 2018, In : Physical Review Letters. 120, 20, p. 1-6 6 p., 208102.

Research output: Contribution to JournalArticle

Open Access

Orthogonal supramolecular protein assembly on patterned bifunctional surfaces

Wasserberg, D., Cabanas-Danés, J., Subramaniam, V., Huskens, J. & Jonkheijm, P., 14 Feb 2018, In : Chemical Communications. 54, 13, p. 1615-1618 4 p.

Research output: Contribution to JournalArticle

File
Open Access
File

Spermine induced reversible collapse of deoxyribonucleic acid-bridged nanoparticle-based assemblies

Göeken, K. L., Schasfoort, R. B. M., Subramaniam, V. & Gill, R., Jan 2018, In : Nano Research. 11, 1, p. 383–396 14 p.

Research output: Contribution to JournalArticle

Open Access
File
2017

Alpha-Synuclein Disease Mutations Are Structurally Defective and Locally Affect Membrane Binding

Robotta, M., Cattani, J., Martins, J. C., Subramaniam, V. & Drescher, M., 20 Mar 2017, In : Journal of the American Chemical Society. 139, 12, p. 4254-4257 4 p.

Research output: Contribution to JournalArticle

Controlling Protein Surface Orientation by Strategic Placement of Oligo-Histidine Tags

Wasserberg, D., Cabanas-Danés, J., Prangsma, J., O'Mahony, S., Cazade, P. A., Tromp, E., Blum, C., Thompson, D., Huskens, J., Subramaniam, V. & Jonkheijm, P., 26 Sep 2017, In : ACS Nano. 11, 9, p. 9068-9083 16 p.

Research output: Contribution to JournalArticle

Open Access

C-Terminal Truncated α-Synuclein Fibrils Contain Strongly Twisted β-Sheets

Iyer, A., Roeters, S. J., Kogan, V., Woutersen, S., Claessens, M. M. A. E. & Subramaniam, V., 1 Nov 2017, In : Journal of the American Chemical Society. 139, 43, p. 15392-15400 9 p.

Research output: Contribution to JournalArticle

Open Access

Direct Visualization of Model Membrane Remodeling by α-Synuclein Fibrillization

Chaudhary, H., Subramaniam, V. & Claessens, M. M. A. E., 20 Jun 2017, In : ChemPhysChem. 18, 12, p. 1620-1626 7 p.

Research output: Contribution to JournalArticle

Open Access

Distinct Mechanisms Determine α-Synuclein Fibril Morphology during Growth and Maturation

Sidhu, A., Segers-Nolten, I., Raussens, V., Claessens, M. M. A. E. & Subramaniam, V., 15 Mar 2017, In : ACS Chemical Neuroscience. 8, 3, p. 538-547 10 p.

Research output: Contribution to JournalArticle

Open Access

Evidence for Intramolecular Antiparallel Beta-Sheet Structure in Alpha-Synuclein Fibrils from a Combination of Two-Dimensional Infrared Spectroscopy and Atomic Force Microscopy

Roeters, S. J., Iyer, A., Pletikapić, G., Kogan, V., Subramaniam, V. & Woutersen, S., 23 Jan 2017, In : Scientific Reports. 7, p. 41051 41051.

Research output: Contribution to JournalArticle

Open Access

Intracellular Manipulation of Phagosomal Transport and Maturation Using Magnetic Tweezers

Shekhar, S., Subramaniam, V. & Kanger, J. S., 2017, In : Methods in Molecular Biology. 1519, p. 93-112 20 p.

Research output: Contribution to JournalArticle

Membrane Binding of Parkinson's Protein α-Synuclein: Effect of Phosphorylation at Positions 87 and 129 by the S to D Mutation Approach

Kumar, P., Schilderink, N., Subramaniam, V. & Huber, M., 1 Jul 2017, In : Israel Journal of Chemistry. 57, 7, p. 762-770 9 p.

Research output: Contribution to JournalArticle

Open Access

Non-uniform self-assembly: On the anisotropic architecture of α-synuclein supra-fibrillar aggregates

Semerdzhiev, S. A., Shvadchak, V. V., Subramaniam, V. & Claessens, M. M. A. E., 1 Dec 2017, In : Scientific Reports. 7, 1, 7699.

Research output: Contribution to JournalArticle

Open Access

Room-temperature in-cell EPR spectroscopy: Alpha-Synuclein disease variants remain intrinsically disordered in the cell

Cattani, J., Subramaniam, V. & Drescher, M., 2017, In : Physical Chemistry Chemical Physics. 19, 28, p. 18147-18151 5 p.

Research output: Contribution to JournalArticle

Solubilization of lipids and lipid phases by the styrene-maleic acid copolymer

Dominguez Pardo, J. J., Dörr, J. M., Iyer, A., Cox, R. C., Scheidelaar, S., Koorengevel, M. C., Subramaniam, V. & Killian, J. A., Jan 2017, In : European Biophysics Journal. 46, 1, p. 91-101 11 p.

Research output: Contribution to JournalArticle

Open Access
2016

Chip based common-path optical coherence tomography system with an on-chip microlens and multi-reference suppression algorithm

Chang, L., Weiss, N., van Leeuwen, T. G., Pollnau, M., de Ridder, R. M., Wörhoff, K., Subramaniam, V. & Kanger, J. S., 13 Jun 2016, In : Optics Express. 24, 12, p. 12635-50 16 p.

Research output: Contribution to JournalArticle

Open Access

Conformational Compatibility Is Essential for Heterologous Aggregation of α-Synuclein

Sidhu, A., Segers-Nolten, I. & Subramaniam, V., 15 Jun 2016, In : ACS Chemical Neuroscience. 7, 6, p. 719-27 9 p.

Research output: Contribution to JournalArticle

Open Access

Direct Observation of α-Synuclein Amyloid Aggregates in Endocytic Vesicles of Neuroblastoma Cells

Apetri, M. M., Harkes, R., Subramaniam, V., Canters, G. W., Schmidt, T. & Aartsma, T. J., 2016, In : PLoS ONE. 11, 4, p. e0153020

Research output: Contribution to JournalArticle

Open Access

Fluorescence Methods for Unraveling Oligomeric Amyloid Intermediates

Zijlstra, N., Schilderink, N. & Subramaniam, V., 2016, In : Methods in Molecular Biology. 1345, p. 151-69 19 p.

Research output: Contribution to JournalArticle

Functionally different α-synuclein inclusions yield insight into Parkinson's disease pathology

Raiss, C. C., Braun, T. S., Konings, I. B. M., Grabmayr, H., Hassink, G. C., Sidhu, A., le Feber, J., Bausch, A. R., Jansen, C., Subramaniam, V. & Claessens, M. M. A. E., 17 Mar 2016, In : Scientific Reports. 6, p. 23116

Research output: Contribution to JournalArticle

Open Access

Membrane-Bound Alpha Synuclein Clusters Induce Impaired Lipid Diffusion and Increased Lipid Packing

Iyer, A., Schilderink, N., Claessens, M. M. A. E. & Subramaniam, V., 6 Dec 2016, In : Biophysical Journal. 111, 11, p. 2440-2449 10 p.

Research output: Contribution to JournalArticle

Open Access

p53 Specifically Binds Triplex DNA In Vitro and in Cells

Brázdová, M., Tichý, V., Helma, R., Bažantová, P., Polášková, A., Krejčí, A., Petr, M., Navrátilová, L., Tichá, O., Nejedlý, K., Bennink, M. L., Subramaniam, V., Bábková, Z., Martínek, T., Lexa, M. & Adámik, M., 2016, In : PLoS ONE. 11, 12, p. e0167439

Research output: Contribution to JournalArticle

Open Access

Size-selective analyte detection with a Young interferometer sensor using multiple wavelengths

Mulder, H. K. P., Blum, C., Subramaniam, V. & Kanger, J. S., 18 Apr 2016, In : Optics Express. 24, 8, p. 8594-619 26 p.

Research output: Contribution to JournalArticle

Open Access

The Impact of N-terminal Acetylation of α-Synuclein on Phospholipid Membrane Binding and Fibril Structure

Iyer, A., Roeters, S. J., Schilderink, N., Hommersom, B., Heeren, R. M. A., Woutersen, S., Claessens, M. M. A. E. & Subramaniam, V., 30 Sep 2016, In : Journal of Biological Chemistry. 291, 40, p. 21110-21122 13 p.

Research output: Contribution to JournalArticle

Open Access

α-Synuclein Oligomers Stabilize Pre-Existing Defects in Supported Bilayers and Propagate Membrane Damage in a Fractal-Like Pattern

Chaudhary, H., Iyer, A., Subramaniam, V. & Claessens, M. M. A. E., 15 Nov 2016, In : Langmuir. 32, 45, p. 11827-11836 10 p.

Research output: Contribution to JournalArticle

Open Access