A tool for gene expression based PubMed search through combining data sources.

M. Korotkiy; R.A. Middelburg; H. Dekker; F.A.H. van Harmelen; J. Lankelma

doi:10.1093/bioinformatics/bth183

A tool for gene expression based PubMed search through combining data sources.

M. Korotkiy, R.A. Middelburg, H. Dekker, F.A.H. van Harmelen, J. Lankelma

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Abstract

We present a new tool for the semi-automated querying of PubMed using a batch of tens to thousands of GenBank accession numbers or UniGene cluster ids. By combining information from UniGene and SWISS-PROT, microGENIE obtains information on the biological relevance of expressed genes, as identified by micro-array experiments, with minimal user intervention and time investment. © Oxford University Press 2004; all rights reserved.

Original language	English
Pages (from-to)	1980-1982
Number of pages	3
Journal	Bioinformatics
Volume	20
Issue number	12
DOIs	https://doi.org/10.1093/bioinformatics/bth183
Publication status	Published - 2004

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title = "A tool for gene expression based PubMed search through combining data sources.",

abstract = "We present a new tool for the semi-automated querying of PubMed using a batch of tens to thousands of GenBank accession numbers or UniGene cluster ids. By combining information from UniGene and SWISS-PROT, microGENIE obtains information on the biological relevance of expressed genes, as identified by micro-array experiments, with minimal user intervention and time investment. {\textcopyright} Oxford University Press 2004; all rights reserved.",

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AU - van Harmelen, F.A.H.

AU - Lankelma, J.

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AB - We present a new tool for the semi-automated querying of PubMed using a batch of tens to thousands of GenBank accession numbers or UniGene cluster ids. By combining information from UniGene and SWISS-PROT, microGENIE obtains information on the biological relevance of expressed genes, as identified by micro-array experiments, with minimal user intervention and time investment. © Oxford University Press 2004; all rights reserved.

U2 - 10.1093/bioinformatics/bth183

DO - 10.1093/bioinformatics/bth183

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JO - Bioinformatics

JF - Bioinformatics

IS - 12

ER -

A tool for gene expression based PubMed search through combining data sources.

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