Cell age dependent concentration of Escherichia coli divisome proteins analyzed with ImageJ and ObjectJ.

N.O. Vischer, J. Verheul, M. Postma, H.B. van den Berg van Saparoea, E. Galli, P. Natale, K. Gerdes, J. Luirink, W. Vollmer, M. Vicente, T. den Blaauwen

Research output: Contribution to JournalArticleAcademicpeer-review

Abstract

The rod-shaped Gram-negative bacterium Escherichia coli multiplies by elongation followed by binary fission. Longitudinal growth of the cell envelope and synthesis of the new poles are organized by two protein complexes called elongasome and divisome, respectively. We have analyzed the spatio-temporal localization patterns of many of these morphogenetic proteins by immunolabeling the wild type strain MC4100 grown to steady state in minimal glucose medium at 28°C. This allowed the direct comparison of morphogenetic protein localization patterns as a function of cell age as imaged by phase contrast and fluorescence wide field microscopy. Under steady state conditions the age distribution of the cells is constant and is directly correlated to cell length. To quantify cell size and protein localization parameters in 1000s of labeled cells, we developed 'Coli-Inspector,' which is a project running under ImageJ with the plugin 'ObjectJ.' ObjectJ organizes image-analysis tasks using an integrated approach with the flexibility to produce different output formats from existing markers such as intensity data and geometrical parameters. ObjectJ supports the combination of automatic and interactive methods giving the user complete control over the method of image analysis and data collection, with visual inspection tools for quick elimination of artifacts. Coli-inspector was used to sort the cells according to division cycle cell age and to analyze the spatio-temporal localization pattern of each protein. A unique dataset has been created on the concentration and position of the proteins during the cell cycle. We show for the first time that a subset of morphogenetic proteins have a constant cellular concentration during the cell division cycle whereas another set exhibits a cell division cycle dependent concentration variation. Using the number of proteins present at midcell, the stoichiometry of the divisome is discussed.
Original languageEnglish
Article number6
Pages (from-to)586
JournalFrontiers in Microbiology
Issue number11
DOIs
Publication statusPublished - 2015

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Escherichia coli Proteins
Proteins
Cell Cycle
Spatio-Temporal Analysis
Cell Cycle Proteins
Age Distribution
Gram-Negative Bacteria
Cell Size
Artifacts
Microscopy
Fluorescence
Escherichia coli
Glucose
Growth

Cite this

Vischer, N.O. ; Verheul, J. ; Postma, M. ; van den Berg van Saparoea, H.B. ; Galli, E. ; Natale, P. ; Gerdes, K. ; Luirink, J. ; Vollmer, W. ; Vicente, M. ; den Blaauwen, T. / Cell age dependent concentration of Escherichia coli divisome proteins analyzed with ImageJ and ObjectJ. In: Frontiers in Microbiology. 2015 ; No. 11. pp. 586.
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abstract = "The rod-shaped Gram-negative bacterium Escherichia coli multiplies by elongation followed by binary fission. Longitudinal growth of the cell envelope and synthesis of the new poles are organized by two protein complexes called elongasome and divisome, respectively. We have analyzed the spatio-temporal localization patterns of many of these morphogenetic proteins by immunolabeling the wild type strain MC4100 grown to steady state in minimal glucose medium at 28°C. This allowed the direct comparison of morphogenetic protein localization patterns as a function of cell age as imaged by phase contrast and fluorescence wide field microscopy. Under steady state conditions the age distribution of the cells is constant and is directly correlated to cell length. To quantify cell size and protein localization parameters in 1000s of labeled cells, we developed 'Coli-Inspector,' which is a project running under ImageJ with the plugin 'ObjectJ.' ObjectJ organizes image-analysis tasks using an integrated approach with the flexibility to produce different output formats from existing markers such as intensity data and geometrical parameters. ObjectJ supports the combination of automatic and interactive methods giving the user complete control over the method of image analysis and data collection, with visual inspection tools for quick elimination of artifacts. Coli-inspector was used to sort the cells according to division cycle cell age and to analyze the spatio-temporal localization pattern of each protein. A unique dataset has been created on the concentration and position of the proteins during the cell cycle. We show for the first time that a subset of morphogenetic proteins have a constant cellular concentration during the cell division cycle whereas another set exhibits a cell division cycle dependent concentration variation. Using the number of proteins present at midcell, the stoichiometry of the divisome is discussed.",
author = "N.O. Vischer and J. Verheul and M. Postma and {van den Berg van Saparoea}, H.B. and E. Galli and P. Natale and K. Gerdes and J. Luirink and W. Vollmer and M. Vicente and {den Blaauwen}, T.",
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Cell age dependent concentration of Escherichia coli divisome proteins analyzed with ImageJ and ObjectJ. / Vischer, N.O.; Verheul, J.; Postma, M.; van den Berg van Saparoea, H.B.; Galli, E.; Natale, P.; Gerdes, K.; Luirink, J.; Vollmer, W.; Vicente, M.; den Blaauwen, T.

In: Frontiers in Microbiology, No. 11, 6, 2015, p. 586.

Research output: Contribution to JournalArticleAcademicpeer-review

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AU - van den Berg van Saparoea, H.B.

AU - Galli, E.

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AU - den Blaauwen, T.

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