CGHcall: calling aberrations for array CGH tumor profiles

M.A. van de Wiel, K.I. Kim, S. Vosse, W.N. van Wieringen, S.M. Wilting, B. Ylstra

Research output: Contribution to JournalArticleAcademicpeer-review

171 Downloads (Pure)


Summary: CGHcall achieves high calling accuracy for array CGH data by effective use of breakpoint information from segmentation and by inclusion of several biological concepts that are ignored by existing algorithms. The algorithm is validated for simulated and verified real array CGH data. By incorporating more than three classes, CGHcall improves detection of single copy gains and amplifications. Moreover, it allows effective inclusion of chromosome arm information. © The Author 2007. Published by Oxford University Press. All rights reserved.
Original languageEnglish
Pages (from-to)892-894
Issue number7
Publication statusPublished - 2007


Dive into the research topics of 'CGHcall: calling aberrations for array CGH tumor profiles'. Together they form a unique fingerprint.

Cite this