Competition between folded and extended structures of alanylalanine (Ala-Ala) in a molecular beam

Vasyl Yatsyna, Ranim Mallat, Tim Gorn, Michael Schmitt, Raimund Feifel, Anouk M. Rijs*, Vitali Zhaunerchyk

*Corresponding author for this work

Research output: Contribution to JournalArticleAcademicpeer-review


We report the gas phase conformational preferences of laser desorbed Ala-Ala dipeptides probed by action spectroscopy using the IRMPD-VUV method. The molecules were internally cooled through collisional cooling in a supersonic jet environment. An IR spectrum was obtained experimentally in the spectral range of 700-1850 cm-1, and subsequently interpreted with the help of quantum chemical calculations. Although theory predicts that folded structures have lower electronic energies and, thus, are more stable at low temperatures compared to their extended (β-strand-like) counterparts, analysis of the experimental data concluded the extended conformer to be the most dominant. An explanation to this observation is discussed in this paper and rationalized in terms of collisional conformer relaxation processes occurring in the supersonic jet molecular beam.

Original languageEnglish
Pages (from-to)14126-14132
Number of pages7
JournalPhysical Chemistry Chemical Physics
Issue number26
Publication statusPublished - 1 Jan 2019
Externally publishedYes


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