Consistent Treatment of Hydrophobicity in Protein Lattice Models Accounts for Cold Denaturation

Erik van Dijk, Patrick Varilly, Tuomas P J Knowles, Daan Frenkel, Sanne Abeln

Research output: Contribution to JournalArticleAcademicpeer-review

Abstract

The hydrophobic effect stabilizes the native structure of proteins by minimizing the unfavorable interactions between hydrophobic residues and water through the formation of a hydrophobic core. Here, we include the entropic and enthalpic contributions of the hydrophobic effect explicitly in an implicit solvent model. This allows us to capture two important effects: a length-scale dependence and a temperature dependence for the solvation of a hydrophobic particle. This consistent treatment of the hydrophobic effect explains cold denaturation and heat capacity measurements of solvated proteins.

Original languageEnglish
Pages (from-to)078101
JournalPhysical Review Letters
Volume116
Issue number7
DOIs
Publication statusPublished - 19 Feb 2016

Keywords

  • Cold Temperature
  • Hydrophobic and Hydrophilic Interactions
  • Models, Chemical
  • Monte Carlo Method
  • Peptides
  • Protein Denaturation
  • Protein Folding
  • Proteins
  • Water
  • Journal Article
  • Research Support, Non-U.S. Gov't

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