Fusion–fission–mitophagy cycling and metabolic reprogramming coordinate nerve growth factor (NGF)-dependent neuronal differentiation

Ilaria Goglia, Ewelina Węglarz-Tomczak, Claudio Gioia, Yanhua Liu, Assunta Virtuoso, Marcella Bonanomi, Daniela Gaglio, Noemi Salmistraro, Ciro De Luca, Michele Papa, Lilia Alberghina, Hans V. Westerhoff*, Anna Maria Colangelo*

*Corresponding author for this work

Research output: Contribution to JournalArticleAcademicpeer-review

Abstract

Neuronal differentiation is regulated by nerve growth factor (NGF) and other neurotrophins. We explored the impact of NGF on mitochondrial dynamics and metabolism through time-lapse imaging, metabolomics profiling, and computer modeling studies. We show that NGF may direct differentiation by stimulating fission, thereby causing selective mitochondrial network fragmentation and mitophagy, ultimately leading to increased mitochondrial quality and respiration. Then, we reconstructed the dynamic fusion–fission–mitophagy cycling of mitochondria in a computer model, integrating these processes into a single network mechanism. Both the computational model and the simulations are able to reproduce the proposed mechanism in terms of mitochondrial dynamics, levels of reactive oxygen species (ROS), mitophagy, and mitochondrial quality, thus providing a computational tool for the interpretation of the experimental data and for future studies aiming to detail further the action of NGF on mitochondrial processes. We also show that changes in these mitochondrial processes are intertwined with a metabolic function of NGF in differentiation: NGF directs a profound metabolic rearrangement involving glycolysis, TCA cycle, and the pentose phosphate pathway, altering the redox balance. This metabolic rewiring may ensure: (a) supply of both energy and building blocks for the anabolic processes needed for morphological reorganization, as well as (b) redox homeostasis.

Original languageEnglish
Pages (from-to)2811-2835
Number of pages25
JournalFEBS Journal
Volume291
Issue number13
Early online date16 Feb 2024
DOIs
Publication statusPublished - Jul 2024

Bibliographical note

Publisher Copyright:
© 2024 The Authors. The FEBS Journal published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies.

Funding

This work was supported by grants from the Italian Ministry of University and Research (MIUR) [PRIN2007 to AMC and MP; ISBE\u2010SYSBIONET\u2013Italian Roadmap of European Strategy Forum on Research Infrastructures (ESFRI) to LA (MP and AMC as Participants); SYSBIO\u2010ISBE.ITALY; Italian Technological National Cluster Life\u2010Science ALISEI\u2013CTN01_00177_165430 IVASCOMAR to AMC; MUR\u2010Competitive Grant for Excellent Department (2018\u20132022) to the Dept of Biotechnology and Biosciences, University Milano\u2010Bicocca]; Netherlands Organization for Scientific Research (NWO) in the integrated program of WOTRO [W01.65.324.00/project 4] Science for Global Development to HVW; Synpol: EU\u2010FP7 [KBBE.2012.3.4\u201002 #311815] to HVW; EU\u2010CORBEL (Coordinated Research Infrastructures Building Enduring Life\u2010science Services) [PID 2354] to HVW and AMC; EU\u2010H2020 [NFRADEV\u20104\u20102014\u20102015#654248] to HVW; Epipredict: EU\u2010H2020 MSCA\u2010ITN\u20102014\u2010ETN; Marie Sk\u0142odowska\u2010Curie Innovative Training Networks (ITN\u2010ETN) [#642691] to HVW; and BBSRC China [BB/J020060/1] to HVW. This work was also supported by Associazione Levi\u2010Montalcini (fellowship to CG); Regione Lombardia \u201CInnovazione, nuovi modelli Tecnologici e Reti per curare la SLA\u201D (INTERSLA, ID 1157625) POR FESR 2014\u20132020 to NS and ELIXIR\u2010IT through ELIXIRNextGenIT (Grant Code IR0000010) to MB. The research leading to these results has received funding from the European Union \u2013 NextGenerationEU through the Italian Ministry of University and Research under PNRR \u2013 M4C2\u2010I1.3 Project PE_00000019 \u201CHEAL ITALIA\u201D to AMC (BTBS\u2010UNIMIB). The views and opinions expressed are those of the authors only and do not necessarily reflect those of the European Union or the European Commission. Neither the European Union nor the European Commission can be held responsible for them. This work was supported by grants from the Italian Ministry of University and Research (MIUR) [PRIN2007\u00A0to AMC and MP; ISBE-SYSBIONET\u2013Italian Roadmap of European Strategy Forum on Research Infrastructures (ESFRI) to LA (MP and AMC as Participants); SYSBIO-ISBE.ITALY; Italian\u00A0Technological National Cluster Life-Science ALISEI\u2013CTN01_00177_165430 IVASCOMAR to AMC; MUR-Competitive Grant for Excellent Department (2018\u20132022) to the Dept of Biotechnology and Biosciences, University Milano-Bicocca]; Netherlands Organization for Scientific Research (NWO) in the integrated program of WOTRO [W01.65.324.00/project 4] Science for Global\u00A0Development to HVW; Synpol: EU-FP7 [KBBE.2012.3.4-02 #311815] to HVW; EU-CORBEL (Coordinated Research Infrastructures Building Enduring Life-science Services) [PID 2354] to HVW and AMC; EU-H2020 [NFRADEV-4-2014-2015#654248] to HVW; Epipredict: EU-H2020 MSCA-ITN-2014-ETN; Marie Sk\u0142odowska-Curie Innovative Training Networks (ITN-ETN) [#642691] to HVW; and BBSRC China [BB/J020060/1] to HVW. This work was also supported by Associazione Levi-Montalcini (fellowship to CG); Regione Lombardia \u201CInnovazione, nuovi modelli Tecnologici e Reti per curare la SLA\u201D (INTERSLA, ID 1157625) POR FESR 2014\u20132020 to NS and ELIXIR-IT through ELIXIRNextGenIT (Grant Code IR0000010) to MB. The research leading to these results has received funding from the European Union \u2013 NextGenerationEU through the Italian Ministry of University and Research under PNRR \u2013 M4C2-I1.3 Project PE_00000019 \u201CHEAL ITALIA\u201D to AMC (BTBS-UNIMIB). The views and opinions expressed are those of the authors only and do not necessarily reflect those of the European Union or the European Commission. Neither the European Union nor the European Commission can be held responsible for them.

FundersFunder number
Italian Roadmap of European Strategy Forum on Research Infrastructures
Science for Global Development
Science for Global Development
Associazione Levi-Montalcini
European Commission
Associazione Levi‐Montalcini
EU-FP7
Italian Technological National Cluster Life-Science
Marie Skłodowska-Curie Innovative Training Networks
ELIXIR-IT
SYSBIO-ISBE
EU-CORBELEU-H2020 MSCA-ITN-2014-ETN, EU-H2020
Ministero dell’Istruzione, dell’Università e della RicercaPNRR – M4C2‐I1.3, PRIN2007, PE_00000019
Nederlandse Organisatie voor Wetenschappelijk Onderzoek642691, 654248, 311815, PID 2354, EU‐FP7
ESFRICTN01_00177_165430
BBSRC ChinaBB/J020060/1
ELIXIR‐ITIR0000010
Regione Lombardia1157625

    Keywords

    • computational modeling
    • metabolism
    • mitochondrial dynamics
    • mitophagy
    • NGF differentiation

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