Microbial Carbon Use Efficiency and Growth Rates in Soil: Global Patterns and Drivers

  • Junxi Hu
  • , Yongxing Cui
  • , Stefano Manzoni
  • , Shixing Zhou
  • , J. Hans C. Cornelissen
  • , Congde Huang*
  • , Joshua Schimel
  • , Yakov Kuzyakov*
  • *Corresponding author for this work

Research output: Contribution to JournalArticleAcademicpeer-review

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Abstract

Carbon use efficiency (CUE) of microbial communities in soil quantifies the proportion of organic carbon (C) taken up by microorganisms that is allocated to growing microbial biomass as well as used for reparation of cell components. This C amount in microbial biomass is subsequently involved in microbial turnover, partly leading to microbial necromass formation, which can be further stabilized in soil. To unravel the underlying regulatory factors and spatial patterns of CUE on a large scale and across biomes (forests, grasslands, croplands), we evaluated 670 individual CUE data obtained by three commonly used approaches: (i) tracing of a substrate C by 13C (or 14C) incorporation into microbial biomass and respired CO2 (hereafter 13C-substrate), (ii) incorporation of 18O from water into DNA (18O-water), and (iii) stoichiometric modelling based on the activities of enzymes responsible for C and nitrogen (N) cycles. The global mean of microbial CUE in soil depends on the approach: 0.59 for the 13C-substrate approach, and 0.34 for the stoichiometric modelling and for the 18O-water approaches. Across biomes, microbial CUE was highest in grassland soils, followed by cropland and forest soils. A power-law relationship was identified between microbial CUE and growth rates, indicating that faster C utilization for growth corresponds to reduced C losses for maintenance and associated with mortality. Microbial growth rate increased with the content of soil organic C, total N, total phosphorus, and fungi/bacteria ratio. Our results contribute to understanding the linkage between microbial growth rates and CUE, thereby offering insights into the impacts of climate change and ecosystem disturbances on microbial physiology with consequences for C cycling.

Original languageEnglish
Article numbere70036
Pages (from-to)1-17
Number of pages17
JournalGlobal Change Biology
Volume31
Issue number1
Early online date21 Jan 2025
DOIs
Publication statusPublished - Jan 2025

Bibliographical note

Publisher Copyright:
© 2025 John Wiley & Sons Ltd.

Funding

This work was supported by China Postdoctoral Science Foundation (2024M763192); China Scholarship Council; Natural Science Foundation of Sichuan Province (2024NSFSC1191, 2025ZNSFSC0266, 2025ZNSFSC1033); RUDN University Strategic Academic Leadership Program; National Natural Science Foundation of China (32101378, 32401425). Funding: This work was supported by the National Natural Science Foundation of China (32401425 and 32101378); the China Postdoctoral Science Foundation (2024M763192); and the Natural Science Foundation of Sichuan Province (2025ZNSFSC0266, 2025ZNSFSC1033, and 2024NSFSC1191). J.H. was financially supported by the China Scholarship Council (202106910020). Y.K. thanks the RUDN University Strategic Academic Leadership Program. The authors are grateful to all the authors whose data were included in this study. The authors thank Guopeng Wu for sharing data. Funding: This work was supported by China Postdoctoral Science Foundation (2024M763192); China Scholarship Council; Natural Science Foundation of Sichuan Province (2024NSFSC1191, 2025ZNSFSC0266, 2025ZNSFSC1033); RUDN University Strategic Academic Leadership Program; National Natural Science Foundation of China (32101378, 32401425). This work was supported by the National Natural Science Foundation of China (32401425 and 32101378); the China Postdoctoral Science Foundation (2024M763192); and the Natural Science Foundation of Sichuan Province (2025ZNSFSC0266, 2025ZNSFSC1033, and 2024NSFSC1191). J.H. was financially supported by the China Scholarship Council (202106910020). Y.K. thanks the RUDN University Strategic Academic Leadership Program. The authors are grateful to all the authors whose data were included in this study. The authors thank Guopeng Wu for sharing data.

FundersFunder number
RUDN University
China Postdoctoral Science Foundation2024M763192
Natural Science Foundation of Sichuan Province2025ZNSFSC0266, 2024NSFSC1191, 2025ZNSFSC1033
National Natural Science Foundation of China202106910020, 32401425, 32101378
China Scholarship Council202106910020

    Keywords

    • carbon cycling
    • carbon use efficiency
    • microbial physiology
    • microbial stoichiometry
    • nutrient limitation

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