Abstract
Mammalian odorant binding proteins (OBPs) have long been suggested to transport hydrophobic odorant molecules through the aqueous environment of the nasal mucus. While the function of OBPs as odorant transporters is supported by their hydrophobic beta-barrel structure, no rationale has been provided on why and how these proteins facilitate the uptake of odorants from the gas phase. Here, a multi-scale computational approach validated through available high-resolution spectroscopy experiments reveals that the conformational space explored by carvone inside the binding cavity of porcine OBP (pOBP) is much closer to the gas than the aqueous phase, and that pOBP effectively manages to transport odorants by lowering the free energy barrier of odorant uptake. Understanding such perireceptor events is crucial to fully unravel the molecular processes underlying the olfactory sense and move towards the development of protein-based biomimetic sensor units that can serve as artificial noses.
Original language | English |
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Article number | e202403058 |
Pages (from-to) | 1-9 |
Number of pages | 9 |
Journal | Chemistry - A European Journal |
Volume | 31 |
Issue number | 2 |
Early online date | 7 Nov 2024 |
DOIs | |
Publication status | Published - 9 Jan 2025 |
Bibliographical note
Publisher Copyright:© 2024 The Author(s). Chemistry - A European Journal published by Wiley-VCH GmbH.
Funding
The authors would like to acknowledge the SURFsara compute cluster hosted by SURF and the BAZIS research cluster hosted by VU for the computational time and the provided technical support. M.P. would like to thank the Erasmus+ trainee-ship program for funds (personal grant M.P.). H.M. would like to thank the Koninklijke Nederlandse Akademie van Wetenschappen and the French Acad\u00E9mie des sciences (Descartes-Huygens Award 2020).
Funders | Funder number |
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SURF | |
Koninklijke Nederlandse Akademie van Wetenschappen | |
French Académie des sciences |
Keywords
- Biosensors
- Carvone
- Enhanced Sampling
- High-Resolution Spectroscopy
- Odorant Binding