Placental vessel segmentation and registration in fetoscopy: Literature review and MICCAI FetReg2021 challenge findings

Sophia Bano, Alessandro Casella, Francisco Vasconcelos, Abdul Qayyum, Abdesslam Benzinou, Moona Mazher, Fabrice Meriaudeau, Chiara Lena, Ilaria Anita Cintorrino, Gaia Romana De Paolis, Jessica Biagioli, Daria Grechishnikova, Jing Jiao, Bizhe Bai, Yanyan Qiao, Binod Bhattarai, Rebati Raman Gaire, Ronast Subedi, Eduard Vazquez, Szymon PłotkaAneta Lisowska, Arkadiusz Sitek, George Attilakos, Ruwan Wimalasundera, Anna L. David, Dario Paladini, Jan Deprest, Elena De Momi, Leonardo S. Mattos, Sara Moccia, Danail Stoyanov

Research output: Contribution to JournalShort surveyAcademicpeer-review

Abstract

Fetoscopy laser photocoagulation is a widely adopted procedure for treating Twin-to-Twin Transfusion Syndrome (TTTS). The procedure involves photocoagulation pathological anastomoses to restore a physiological blood exchange among twins. The procedure is particularly challenging, from the surgeon's side, due to the limited field of view, poor manoeuvrability of the fetoscope, poor visibility due to amniotic fluid turbidity, and variability in illumination. These challenges may lead to increased surgery time and incomplete ablation of pathological anastomoses, resulting in persistent TTTS. Computer-assisted intervention (CAI) can provide TTTS surgeons with decision support and context awareness by identifying key structures in the scene and expanding the fetoscopic field of view through video mosaicking. Research in this domain has been hampered by the lack of high-quality data to design, develop and test CAI algorithms. Through the Fetoscopic Placental Vessel Segmentation and Registration (FetReg2021) challenge, which was organized as part of the MICCAI2021 Endoscopic Vision (EndoVis) challenge, we released the first large-scale multi-center TTTS dataset for the development of generalized and robust semantic segmentation and video mosaicking algorithms with a focus on creating drift-free mosaics from long duration fetoscopy videos. For this challenge, we released a dataset of 2060 images, pixel-annotated for vessels, tool, fetus and background classes, from 18 in-vivo TTTS fetoscopy procedures and 18 short video clips of an average length of 411 frames for developing placental scene segmentation and frame registration for mosaicking techniques. Seven teams participated in this challenge and their model performance was assessed on an unseen test dataset of 658 pixel-annotated images from 6 fetoscopic procedures and 6 short clips. For the segmentation task, overall baseline performed was the top performing (aggregated mIoU of 0.6763) and was the best on the vessel class (mIoU of 0.5817) while team RREB was the best on the tool (mIoU of 0.6335) and fetus (mIoU of 0.5178) classes. For the registration task, overall the baseline performed better than team SANO with an overall mean 5-frame SSIM of 0.9348. Qualitatively, it was observed that team SANO performed better in planar scenarios, while baseline was better in non-planner scenarios. The detailed analysis showed that no single team outperformed on all 6 test fetoscopic videos. The challenge provided an opportunity to create generalized solutions for fetoscopic scene understanding and mosaicking. In this paper, we present the findings of the FetReg2021 challenge, alongside reporting a detailed literature review for CAI in TTTS fetoscopy. Through this challenge, its analysis and the release of multi-center fetoscopic data, we provide a benchmark for future research in this field.
Original languageEnglish
Article number103066
JournalMedical Image Analysis
Volume92
DOIs
Publication statusPublished - 1 Feb 2024
Externally publishedYes

Funding

We are grateful to NVIDIA, Medtronic and E4 Computing for sponsoring the FetReg2021 challenge. This work was supported by the Wellcome/EPSRC Centre for Interventional and Surgical Sciences, UK (WEISS) at UCL ( 203145Z/16/Z ), the Engineering and Physical Sciences Research Council, UK ( EP/P027938/1 , EP/R004080/1 , EP/P012841/1 , NS/A000027/1 ), the Royal Academy of Engineering Chair in Emerging Technologies Scheme, UK , Horizon 2020 FET Open ( 863146 ) and Wellcome, UK [ WT101957 ]. Anna L. David is supported by the NIHR UCLH Biomedical Research Center, UK . For the purpose of open access, the author has applied a CC BY public copyright license to any author accepted manuscript version arising from this submission. We are grateful to NVIDIA, Medtronic and E4 Computing for sponsoring the FetReg2021 challenge. This work was supported by the Wellcome/EPSRC Centre for Interventional and Surgical Sciences, UK (WEISS) at UCL (203145Z/16/Z), the Engineering and Physical Sciences Research Council, UK (EP/P027938/1, EP/R004080/1, EP/P012841/1, NS/A000027/1), the Royal Academy of Engineering Chair in Emerging Technologies Scheme, UK, Horizon 2020 FET Open (863146) and Wellcome, UK [WT101957]. Anna L. David is supported by the NIHR UCLH Biomedical Research Center, UK. For the purpose of open access, the author has applied a CC BY public copyright license to any author accepted manuscript version arising from this submission.

FundersFunder number
NIHR UCLH
Medtronic203145Z/16/Z
Nvidia
Wellcome TrustWT101957
Engineering and Physical Sciences Research CouncilEP/P012841/1, NS/A000027/1, EP/P027938/1, EP/R004080/1
Royal Academy of Engineering
Horizon 2020863146

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