Probabilistic combination of classification rules and its application to medical diagnosis

Jakub M. Tomczak*, Maciej Zięba

*Corresponding author for this work

Research output: Contribution to JournalArticleAcademicpeer-review

Abstract

Application of machine learning to medical diagnosis entails facing two major issues, namely, a necessity of learning comprehensible models and a need of coping with imbalanced data phenomenon. The first one corresponds to a problem of implementing interpretable models, e.g., classification rules or decision trees. The second issue represents a situation in which the number of examples from one class (e.g., healthy patients) is significantly higher than the number of examples from the other class (e.g., ill patients). Learning algorithms which are prone to the imbalance data return biased models towards the majority class. In this paper, we propose a probabilistic combination of soft rules, which can be seen as a probabilistic version of the classification rules, by introducing new latent random variable called conjunctive feature. The conjunctive features represent conjunctions of values of attribute variables (features) and we assume that for given conjunctive feature the object and its label (class) become independent random variables. In order to deal with the between class imbalance problem, we present a new estimator which incorporates the knowledge about data imbalanceness into hyperparameters of initial probability of objects with fixed class labels. Additionally, we propose a method for aggregating sufficient statistics needed to estimate probabilities in a graph-based structure to speed up computations. At the end, we carry out two experiments: (1) using benchmark datasets, (2) using medical datasets. The results are discussed and the conclusions are drawn.

Original languageEnglish
Pages (from-to)105-135
Number of pages31
JournalMachine Learning
Volume101
Issue number1-3
DOIs
Publication statusPublished - 26 Oct 2015
Externally publishedYes

Keywords

  • Classification rules
  • Imbalanced data
  • Medical diagnosis
  • Probabilistic combination

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