Abstract
The effects on the activity of thyroxine (T4) due to the chalcogen replacement in a series of peri-substituted naphthalenes mimicking the catalytic function of deiodinase enzymes are computationally examined using density functional theory. In particular, T4 inner-ring deiodination pathways assisted by naphthyl-based models bearing two tellurols and a tellurol-thiol pair in peri-position are explored and compared with the analogous energy profiles for the naphthalene mimic having two selenols. The presence of a halogen bond (XB) in the intermediate formed in the first step and involved in the rate-determining step of the reaction is assumed to facilitate the process increasing the rate of the reaction. The rate-determining step calculated energy barrier heights allow rationalizing the experimentally observed superior catalytic activity of tellurium containing mimics. Charge displacement analysis is used to ascertain the presence and the role of the electron density charge transfer occurring in the rate-determining step of the reaction, suggesting the incipient formation or presence of a XB interaction.
Original language | English |
---|---|
Pages (from-to) | 944-951 |
Number of pages | 8 |
Journal | Journal of Computational Chemistry |
Volume | 40 |
Issue number | 8 |
Early online date | 25 Jan 2019 |
DOIs | |
Publication status | Published - 30 Mar 2019 |
Funding
[a] D. Cesario Department of Chemistry and Pharmaceutical Sciences, Amsterdam Center for Multiscale Modeling, Vrije Universiteit Amsterdam, 1081 HV, Amsterdam, The Netherlands [b] D. Cesario, F. Nunzi Department of Chemistry, Biology and Biotechnology, University of Perugia, I-06123, Perugia, Italy [c] M. Fortino, T. Marino, N. Russo, E. Sicilia Dipartimento di Chimica e Tecnologie Chimiche, Università della Calabria, I-87030, Arcavacata di Rende, Italy E-mail: [email protected] [d] F. Nunzi Istituto di Scienze e Tecnologie Molecolari del CNR (ISTM-CNR), I-06123, Perugia, Italy [e] F. Nunzi Consortium for Computational Molecular and Materials Sciences (CMS)2, I-06123, Perugia, Italy Contract Grant sponsor: Università degli Studi di Perugia; Contract Grant sponsor: MIUR; Contract Grant sponsor: Università della Calabria This work has been financially supported by Università della Calabria and carried out within the FP7-PEOPLE-2011-IRSES, Project no. 295172, and by MIUR and Università degli Studi di Perugia through the project AMIS, within the program “Dipartimenti di Eccellenza – 2018–2022.”
Funders | Funder number |
---|---|
Ministero dell’Istruzione, dell’Università e della Ricerca | |
Università della Calabria | 295172 |
Università degli Studi di Perugia |
Keywords
- charge displacement
- deiodinase mimics
- density functional theory
- halogen bond
- mechanism