Abstract
PIWI-interacting RNAs (piRNAs) comprise a class of small RNAs best known for suppressing transposable elements in germline tissues. The vector mosquito Aedes aegypti encodes seven PIWI genes, four of which are somatically expressed. This somatic piRNA pathway generates piRNAs from viral RNA during infection with cytoplasmic RNA viruses through ping-pong amplification by the PIWI proteins Ago3 and Piwi5. Yet, additional insights into the molecular mechanisms mediating non-canonical piRNA production are lacking. TUDOR-domain containing (Tudor) proteins facilitate piRNA biogenesis in Drosophila melanogaster and other model organisms. We thus hypothesized that Tudor proteins are required for viral piRNA production and performed a knockdown screen targeting all A. aegypti Tudor genes. Knockdown of the Tudor genes AAEL012437, Vreteno, Yb, SMN and AAEL008101- RB resulted in significantly reduced viral piRNA levels, with AAEL012437-depletion having the strongest effect. This protein, which we named Veneno, associates directly with Ago3 in an sDMA-dependent manner and localizes in cytoplasmic foci reminiscent of piRNA processing granules of Drosophila. Veneno-interactome analyses reveal a network of cofactors including the orthologs of the Drosophila piRNA pathway components Vasa and Yb, which in turn interacts with Piwi5. We propose that Veneno assembles amulti-protein complex for ping-pong dependent piRNA production from viral RNA.
Original language | English |
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Pages (from-to) | 2546-2559 |
Journal | Nucleic acids research |
Volume | 47 |
Issue number | 5 |
DOIs | |
Publication status | Published - 18 Mar 2019 |
Externally published | Yes |
Funding
Radboud University Medical Center PhD Fellowship (to P.M.); European Research Council (ERC) Consolidator Grant under the European Union’s Seventh Frame-work Programme [ERC CoG 615680 to R.P.vR.]; Netherlands Organization for scientific Research, VICI Grant [016.VICI.170.090 to R.P.vR.]; Dutch Cancer Society, The Oncode Institute (to M.V.).Funding for open access charge: ERC [ERC CoG 615680]. Conflict of interest statement. None declared.
Funders | Funder number |
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Seventh Framework Programme | 615680 |
European Research Council | |
Seventh Framework Programme |