Transcriptional effects of cadmium on iron homeostasis differ in calamine accessions of Noccaea caerulescens

Pauliina Halimaa*, Daniel Blande, Erol Baltzi, Mark G.M. Aarts, Lars Granlund, Markku Keinänen, Sirpa O. Kärenlampi, Anna D. Kozhevnikova, Sirpa Peräniemi, Henk Schat, Ilya V. Seregin, Marjo Tuomainen, Arja I. Tervahauta

*Corresponding author for this work

    Research output: Contribution to JournalArticleAcademicpeer-review

    Abstract

    Calamine accessions of the zinc/cadmium/nickel hyperaccumulator, Noccaea caerulescens, exhibit striking variation in foliar cadmium accumulation in nature. The Ganges accession (GA) from Southern France displays foliar cadmium hyperaccumulation (>1000 μg g −1 DW), whereas the accession La Calamine (LC) from Belgium, with similar local soil metal composition, does not (<100 μg g −1 DW). All calamine accessions are cadmium hypertolerant. To find out the differences between LC and GA in their basic adaptation mechanisms, we bypassed the cadmium excluding phenotype of LC by exposing the plants to 50 μm cadmium in hydroponics, achieving equal cadmium accumulation in the shoots. The iron content increased in the roots of both accessions. GA exhibited significant decreases in manganese and zinc contents in the roots and shoots, approaching those in LC. Altogether 702 genes responded differently to cadmium exposure between the accessions, 157 and 545 in the roots and shoots, respectively. Cadmium-exposed LC showed a stress response and had decreased levels of a wide range of photosynthesis-related transcripts. GA showed less changes, mainly exhibiting an iron deficiency-like response. This included increased expression of genes encoding five iron deficiency-regulated bHLH transcription factors, ferric reduction oxidase FRO2, iron transporters IRT1 and OPT3, and nicotianamine synthase NAS1, and decreased expression of genes encoding ferritins and NEET (a NEET family iron-sulfur protein), which is possibly involved in iron transfer, distribution and/or management. The function of the IRT1 gene in the accessions was compared. We conclude that the major difference between the two accessions is in the way they cope with iron under cadmium exposure.

    Original languageEnglish
    Pages (from-to)306-320
    Number of pages15
    JournalPlant Journal
    Volume97
    Issue number2
    Early online date4 Oct 2018
    DOIs
    Publication statusPublished - Jan 2019

    Funding

    This work was financially supported by the Academy of Finland grant to S.O.K. (project number 260552). The work of A.K. and I.S. was partially supported by the Russian Foundation for Basic Research (project № 15-04-02236). Niko Vallinrinne is acknowledged for the spectral imaging work. The CSC—IT Center for Science, Finland, was acknowledged for generous computational resources.

    FundersFunder number
    Russian Foundation for Basic Research15-04-02236
    Academy of Finland260552

      Keywords

      • cadmium
      • Illumina
      • iron deficiency
      • IRT1
      • Noccaea caerulescens
      • RNA-seq
      • spectral imaging
      • Thlaspi caerulescens
      • transcriptome

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